RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 RAD50Q92878 1312 aa10.06□□□□□ -0.8
NEDD4L-218ENST00000587547 COL2A1P02458 1487 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 SGSM2O43147 1006 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 PRKAB2O43741 272 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 APPP05067 770 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 USP5P45974 858 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 MFAP1P55081 439 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 PPP4CP60510 307 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 PICALMQ13492 652 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 C8orf34Q49A92 452 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 FAM109BQ6ICB4 259 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 SDR42E1Q8WUS8 393 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 STRBPQ96SI9 672 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
NEDD4L-218ENST00000587547 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 INPP5BP32019 993 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 PLA2G5P39877 138 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 TNNI2P48788 182 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 RHBDL3P58872 404 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 PPATQ06203 517 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 MAPKAPK5Q8IW41 473 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 MAFAQ8NHW3 353 aaPredicted RBP10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 TGFBRAP1Q8WUH2 860 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 PARK7Q99497 189 aaKnown RBP10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 ANO2Q9NQ90 1003 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 KCNH4Q9UQ05 1017 aa10.04□□□□□ -0.8
NEDD4L-218ENST00000587547 MGAMO43451 1857 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 GNAT2P19087 354 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 TCP10Q12799 353 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 NFIAQ12857 509 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 IRF5Q13568 498 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 VPS53Q5VIR6 699 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 GPAT2Q6NUI2 795 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 CERS3Q8IU89 383 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 ANKLE1Q8NAG6 615 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 CDX2Q99626 313 aaPredicted RBP10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 SAP30BPQ9UHR5 308 aaKnown RBP10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 MYH4Q9Y623 1939 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 PFASO15067 1338 aa10.03□□□□□ -0.8
NEDD4L-218ENST00000587547 GSG1L2A8MUP6 293 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 TNPO2O14787 897 aaKnown RBP10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 HSPD1P10809 573 aaKnown RBP10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 CAPN2P17655 700 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 TDO2P48775 406 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 PTH1RQ03431 593 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 MIGA2Q7L4E1 593 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 NACAP1Q9BZK3 213 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 C11orf49Q9H6J7 331 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 EPB41L4AQ9HCS5 686 aaPredicted RBP10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 DDX4Q9NQI0 724 aaKnown RBP10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 PNMA3Q9UL41 463 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 FLT1P17948 1338 aa10.02□□□□□ -0.81
NEDD4L-218ENST00000587547 PATL2C9JE40 543 aaKnown RBP10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 REC8O95072 547 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 TRIM32Q13049 653 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 ZFPM1Q8IX07 1006 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 IFNL3Q8IZI9 196 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 TATDN2Q93075 761 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 LSG1Q9H089 658 aaKnown RBP10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 NAPBQ9H115 298 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 DCP1AQ9NPI6 582 aaPredicted RBP10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
NEDD4L-218ENST00000587547 CDH23Q9H251 3354 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 CYP2D7A0A087X1C5 515 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 MINDY4BA8MYZ0 360 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 FOXP2O15409 715 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 EIF5BO60841 1220 aaKnown RBP10□□□□□ -0.81
NEDD4L-218ENST00000587547 ENTPD3O75355 529 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
NEDD4L-218ENST00000587547 CYP2D6P10635 497 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 DNAJB2P25686 324 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 CLK2P49760 499 aaKnown RBP10□□□□□ -0.81
NEDD4L-218ENST00000587547 HAND2P61296 217 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 PACS2Q86VP3 889 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 STK11IPQ8N1F8 1099 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 MYLIPQ8WY64 445 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 DSCC1Q9BVC3 393 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 GNL3Q9BVP2 549 aaKnown RBP eCLIP10□□□□□ -0.81
NEDD4L-218ENST00000587547 IDI2Q9BXS1 227 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 ZNF341Q9BYN7 854 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 OSBPL5Q9H0X9 879 aaPredicted RBP10□□□□□ -0.81
NEDD4L-218ENST00000587547 ATP8A2Q9NTI2 1148 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 PALD1Q9ULE6 856 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 RBM8AQ9Y5S9 174 aaKnown RBP10□□□□□ -0.81
NEDD4L-218ENST00000587547 DOCK1Q14185 1865 aa10□□□□□ -0.81
NEDD4L-218ENST00000587547 USP17L12C9JPN9 530 aa9.99□□□□□ -0.81
NEDD4L-218ENST00000587547 USP17L21D6R901 530 aa9.99□□□□□ -0.81
NEDD4L-218ENST00000587547 TNFRSF10AO00220 468 aa9.99□□□□□ -0.81
NEDD4L-218ENST00000587547 FGAP02671 866 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms