RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
CALR-204ENST00000586967 CWC22Q9HCG8 908 aaKnown RBP17.13■□□□□ 0.33
CALR-204ENST00000586967 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
CALR-204ENST00000586967 TRIM75PA6NK02 468 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 IFNAR1P17181 557 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
CALR-204ENST00000586967 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
CALR-204ENST00000586967 ZNF543Q08ER8 600 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 SH3D19Q5HYK7 790 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 TMTC3Q6ZXV5 915 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 FASTKD5Q7L8L6 764 aaKnown RBP17.12■□□□□ 0.33
CALR-204ENST00000586967 FAM160B2Q86V87 743 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 NECAB1Q8N987 351 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 CHURC1Q8WUH1 139 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 HHIPL1Q96JK4 782 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 MAD2L2Q9UI95 211 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
CALR-204ENST00000586967 PLA2G6O60733 806 aa17.11■□□□□ 0.33
CALR-204ENST00000586967 RXRAP19793 462 aa17.11■□□□□ 0.33
CALR-204ENST00000586967 IKQ13123 557 aaPredicted RBP17.11■□□□□ 0.33
CALR-204ENST00000586967 PABPC4Q13310 644 aaKnown RBP eCLIP17.11■□□□□ 0.333e-18■□□□□ 11.1
CALR-204ENST00000586967 SNAPC2Q13487 334 aa17.11■□□□□ 0.33
CALR-204ENST00000586967 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
CALR-204ENST00000586967 PROCA1Q8NCQ7 364 aaPredicted RBP17.11■□□□□ 0.33
CALR-204ENST00000586967 SPZ1Q9BXG8 430 aa17.11■□□□□ 0.33
CALR-204ENST00000586967 NCOA5Q9HCD5 579 aaKnown RBP17.11■□□□□ 0.33
CALR-204ENST00000586967 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.11■□□□□ 0.33
CALR-204ENST00000586967 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
CALR-204ENST00000586967 KCNH4Q9UQ05 1017 aa17.11■□□□□ 0.33
CALR-204ENST00000586967 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
CALR-204ENST00000586967 PDCP20941 246 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 CDC27P30260 824 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 ADD1P35611 737 aaKnown RBP17.1■□□□□ 0.33
CALR-204ENST00000586967 STAT2P52630 851 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 GTF2A2P52657 109 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 TRAF1Q13077 416 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 RGMBQ6NW40 437 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 CCDC84Q86UT8 332 aaPredicted RBP17.1■□□□□ 0.33
CALR-204ENST00000586967 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 FAM184AQ8NB25 1140 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
CALR-204ENST00000586967 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.1■□□□□ 0.33
CALR-204ENST00000586967 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
CALR-204ENST00000586967 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
CALR-204ENST00000586967 A0A0G2JLL6 359 aaPredicted RBP17.09■□□□□ 0.33
CALR-204ENST00000586967 IRF6O14896 467 aa17.09■□□□□ 0.33
CALR-204ENST00000586967 FDX1P10109 184 aa17.09■□□□□ 0.33
CALR-204ENST00000586967 CETPP11597 493 aa17.09■□□□□ 0.33
CALR-204ENST00000586967 XBP1P17861 261 aa17.09■□□□□ 0.33
CALR-204ENST00000586967 ZNF157P51786 506 aaPredicted RBP17.09■□□□□ 0.33
CALR-204ENST00000586967 HMGCS2P54868 508 aa17.09■□□□□ 0.33
CALR-204ENST00000586967 PRRT2Q7Z6L0 340 aaPredicted RBP17.09■□□□□ 0.33
CALR-204ENST00000586967 SPICE1Q8N0Z3 855 aa17.09■□□□□ 0.33
CALR-204ENST00000586967 NSUN7Q8NE18 718 aaKnown RBP17.09■□□□□ 0.33
CALR-204ENST00000586967 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
CALR-204ENST00000586967 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
CALR-204ENST00000586967 PNMA2Q9UL42 364 aa17.09■□□□□ 0.33
CALR-204ENST00000586967 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
CALR-204ENST00000586967 PTPDC1A2A3K4 754 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 TMEM232C9JQI7 657 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.32
CALR-204ENST00000586967 DEXIO95424 95 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.32
CALR-204ENST00000586967 VCAM1P19320 739 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 KCTD1Q719H9 257 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 RRP36Q96EU6 259 aaKnown RBP17.08■□□□□ 0.32
CALR-204ENST00000586967 TANGO6Q9C0B7 1094 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 EMILIN3Q9NT22 766 aa17.08■□□□□ 0.32
CALR-204ENST00000586967 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 hCG_1984214I3L0E3 225 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 GOLGA8HP0CJ92 632 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 APLP1P51693 650 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 NTRK3Q16288 839 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 FAM177A1Q8N128 213 aaPredicted RBP17.07■□□□□ 0.32
CALR-204ENST00000586967 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 SRBD1Q8N5C6 995 aaKnown RBP17.07■□□□□ 0.32
CALR-204ENST00000586967 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
CALR-204ENST00000586967 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
CALR-204ENST00000586967 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 SLC26A6Q9BXS9 759 aa17.07■□□□□ 0.32
CALR-204ENST00000586967 RPAP3Q9H6T3 665 aaPredicted RBP17.07■□□□□ 0.32
CALR-204ENST00000586967 RIOX1Q9H6W3 641 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms