RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 LRRCC1Q9C099 1032 aa24.18■■□□□ 1.46
CLPTM1-204ENST00000585961 SH2D4AQ9H788 454 aa24.18■■□□□ 1.46
CLPTM1-204ENST00000585961 WDR46O15213 610 aaKnown RBP24.17■■□□□ 1.46
CLPTM1-204ENST00000585961 ADCYAP1R1P41586 468 aa24.17■■□□□ 1.46
CLPTM1-204ENST00000585961 MAML3Q96JK9 1138 aa24.17■■□□□ 1.46
CLPTM1-204ENST00000585961 KANSL2Q9H9L4 492 aa24.17■■□□□ 1.46
CLPTM1-204ENST00000585961 PRKAG2Q9UGJ0 569 aa24.17■■□□□ 1.46
CLPTM1-204ENST00000585961 KBTBD13C9JR72 458 aa24.16■■□□□ 1.46
CLPTM1-204ENST00000585961 SEPT4O43236 478 aa24.16■■□□□ 1.46
CLPTM1-204ENST00000585961 MMP19Q99542 508 aa24.16■■□□□ 1.46
CLPTM1-204ENST00000585961 CHMP4BQ9H444 224 aaKnown RBP24.16■■□□□ 1.46
CLPTM1-204ENST00000585961 NAV1Q8NEY1 1877 aa24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 SLC4A3P48751 1232 aa24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 FAM83BQ5T0W9 1011 aa24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 ZSCAN25Q6NSZ9 544 aa24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 ABRAQ8N0Z2 381 aa24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 FAM161BQ96MY7 647 aa24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 NUP88Q99567 741 aaPredicted RBP24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 PRDM5Q9NQX1 630 aaPredicted RBP24.15■■□□□ 1.46
CLPTM1-204ENST00000585961 MINDY4BA8MYZ0 360 aa24.14■■□□□ 1.45
CLPTM1-204ENST00000585961 SLC25A27O95847 323 aa24.14■■□□□ 1.45
CLPTM1-204ENST00000585961 STAT3P40763 770 aa24.14■■□□□ 1.45
CLPTM1-204ENST00000585961 STRBPQ96SI9 672 aaKnown RBP24.14■■□□□ 1.45
CLPTM1-204ENST00000585961 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.14■■□□□ 1.45
CLPTM1-204ENST00000585961 ADAMTS5Q9UNA0 930 aa24.14■■□□□ 1.45
CLPTM1-204ENST00000585961 VWA5AO00534 786 aa24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 TAL1P17542 331 aaPredicted RBP24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 LRRC41Q15345 812 aa24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 TRIM60Q495X7 471 aa24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 FAM47AQ5JRC9 791 aa24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 TSHZ3Q63HK5 1081 aa24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 MKNK2Q9HBH9 465 aa24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 GOPCQ9HD26 462 aa24.13■■□□□ 1.45
CLPTM1-204ENST00000585961 SH3RF1Q7Z6J0 888 aa24.12■■□□□ 1.45
CLPTM1-204ENST00000585961 RIOX2Q8IUF8 465 aa24.12■■□□□ 1.45
CLPTM1-204ENST00000585961 ECHDC1Q9NTX5 307 aa24.12■■□□□ 1.45
CLPTM1-204ENST00000585961 PPP1R9AQ9ULJ8 1098 aa24.12■■□□□ 1.45
CLPTM1-204ENST00000585961 STXBP5LQ9Y2K9 1186 aa24.12■■□□□ 1.45
CLPTM1-204ENST00000585961 LAMA2P24043 3122 aaKnown RBP24.11■■□□□ 1.45
CLPTM1-204ENST00000585961 GSG1L2A8MUP6 293 aa24.11■■□□□ 1.45
CLPTM1-204ENST00000585961 PGK1P00558 417 aa24.11■■□□□ 1.45
CLPTM1-204ENST00000585961 SHHQ15465 462 aa24.11■■□□□ 1.45
CLPTM1-204ENST00000585961 BADQ92934 168 aa24.11■■□□□ 1.45
CLPTM1-204ENST00000585961 OSBP2Q969R2 916 aa24.11■■□□□ 1.45
CLPTM1-204ENST00000585961 BAZ2AQ9UIF9 1905 aaKnown RBP24.11■■□□□ 1.45
CLPTM1-204ENST00000585961 POTEB2H3BUK9 544 aa24.1■■□□□ 1.45
CLPTM1-204ENST00000585961 KCTD2Q14681 263 aa24.1■■□□□ 1.45
CLPTM1-204ENST00000585961 ZNF792Q3KQV3 632 aa24.1■■□□□ 1.45
CLPTM1-204ENST00000585961 TINF2Q9BSI4 451 aa24.1■■□□□ 1.45
CLPTM1-204ENST00000585961 CLIP2Q9UDT6 1046 aa24.1■■□□□ 1.45
CLPTM1-204ENST00000585961 RLFQ13129 1914 aa24.1■■□□□ 1.45
CLPTM1-204ENST00000585961 TRIM43BA6NCK2 446 aa24.09■■□□□ 1.45
CLPTM1-204ENST00000585961 F5H6K3 240 aa24.09■■□□□ 1.45
CLPTM1-204ENST00000585961 RASA1P20936 1047 aa24.09■■□□□ 1.45
CLPTM1-204ENST00000585961 KLRC3Q07444 240 aa24.09■■□□□ 1.45
CLPTM1-204ENST00000585961 TRIM43Q96BQ3 446 aaPredicted RBP24.09■■□□□ 1.45
CLPTM1-204ENST00000585961 XPNPEP3Q9NQH7 507 aa24.09■■□□□ 1.45
CLPTM1-204ENST00000585961 APPP05067 770 aa24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 RARBP10826 455 aa24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 TLE2Q04725 743 aa24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 SBK1Q52WX2 424 aa24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 C9orf50Q5SZB4 431 aa24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 REPS2Q8NFH8 660 aa24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 LENG1Q96BZ8 264 aaPredicted RBP24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 ARPP21Q9UBL0 812 aaPredicted RBP24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 ZNF214Q9UL59 606 aaPredicted RBP24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 RIPK3Q9Y572 518 aa24.08■■□□□ 1.45
CLPTM1-204ENST00000585961 PRDM1O75626 825 aa24.07■■□□□ 1.44
CLPTM1-204ENST00000585961 CPXCR1Q8N123 301 aa24.07■■□□□ 1.44
CLPTM1-204ENST00000585961 KBTBD3Q8NAB2 608 aa24.07■■□□□ 1.44
CLPTM1-204ENST00000585961 CHMP4CQ96CF2 233 aa24.07■■□□□ 1.44
CLPTM1-204ENST00000585961 RNF113AO15541 343 aaKnown RBP24.06■■□□□ 1.44
CLPTM1-204ENST00000585961 NDUFB10O96000 172 aa24.06■■□□□ 1.44
CLPTM1-204ENST00000585961 ZNF444Q8N0Y2 327 aaPredicted RBP24.06■■□□□ 1.44
CLPTM1-204ENST00000585961 DDX11Q96FC9 970 aa24.06■■□□□ 1.44
CLPTM1-204ENST00000585961 SLF1Q9BQI6 1058 aa24.06■■□□□ 1.44
CLPTM1-204ENST00000585961 SMCHD1A6NHR9 2005 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 ZNF865P0CJ78 1059 aaPredicted RBP24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 SNRNP48Q6IEG0 339 aaKnown RBP24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 APPBP2Q92624 585 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 KIFC2Q96AC6 838 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 GUCD1Q96NT3 240 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 DCTPP1Q9H773 170 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 PDLIM7Q9NR12 457 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 NYAP2Q9P242 653 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 DIS3Q9Y2L1 958 aaKnown RBP24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 FRMPD3Q5JV73 1810 aa24.05■■□□□ 1.44
CLPTM1-204ENST00000585961 M0R2C6 588 aa24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 ITGB8P26012 769 aa24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 TDO2P48775 406 aa24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 SNX17Q15036 470 aa24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 RNF180Q86T96 592 aa24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 RAVER2Q9HCJ3 691 aaKnown RBP24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 PHF24Q9UPV7 400 aa24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 CTDP1Q9Y5B0 961 aaPredicted RBP24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 ZNFX1Q9P2E3 1918 aaKnown RBP24.04■■□□□ 1.44
CLPTM1-204ENST00000585961 GPAA1O43292 621 aa24.03■■□□□ 1.44
CLPTM1-204ENST00000585961 GIMAP6Q6P9H5 292 aa24.03■■□□□ 1.44
CLPTM1-204ENST00000585961 PRPF38AQ8NAV1 312 aaKnown RBP24.03■■□□□ 1.44
CLPTM1-204ENST00000585961 GPATCH3Q96I76 525 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms