RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 MCM3APO60318 1980 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 F5H6K3 240 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 ADCY3O60266 1144 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 FLOT1O75955 427 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 XRCC5P13010 732 aaKnown RBP10.23□□□□□ -0.77
ATG4D-202ENST00000585437 NT5C2P49902 561 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 CCNA1P78396 465 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 TFAP4Q01664 338 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 KLRC3Q07444 240 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 FAM47AQ5JRC9 791 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 MORN1Q5T089 497 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 GPR142Q7Z601 462 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 SHCBP1Q8NEM2 672 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 REPS2Q8NFH8 660 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 STAG1Q8WVM7 1258 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 ATG4CQ96DT6 458 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 INCENPQ9NQS7 918 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 FBXO28Q9NVF7 368 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 PPP1R9AQ9ULJ8 1098 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
ATG4D-202ENST00000585437 TSPY2A6NKD2 308 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 IGHA2P01877 340 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 HOXC6P09630 235 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 ELNP15502 786 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 CHMLP26374 656 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 ATP2B2Q01814 1243 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
ATG4D-202ENST00000585437 GRB14Q14449 540 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 MTFR1Q15390 333 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 AKNAD1Q5T1N1 836 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 PLEKHH3Q7Z736 793 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 NKX2-3Q8TAU0 364 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 TRIB2Q92519 343 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 SHISA4Q96DD7 197 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 GMCL1Q96IK5 515 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 MOV10L1Q9BXT6 1211 aaKnown RBP10.22□□□□□ -0.77
ATG4D-202ENST00000585437 BACH2Q9BYV9 841 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 SPATC1LQ9H0A9 340 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 TCP11L1Q9NUJ3 509 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 ZNF214Q9UL59 606 aaPredicted RBP10.22□□□□□ -0.77
ATG4D-202ENST00000585437 NEDD4P46934 1319 aa10.22□□□□□ -0.77
ATG4D-202ENST00000585437 VWA5AO00534 786 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 ATP2A1O14983 1001 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 NMT2O60551 498 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 HMGCRP04035 888 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 INHAP05111 366 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 PTPREP23469 700 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 HAND2P61296 217 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 TMEM132BQ14DG7 1078 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 MAP3K21Q5TCX8 1036 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 RCSD1Q6JBY9 416 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.77
ATG4D-202ENST00000585437 NUP88Q99567 741 aaPredicted RBP10.21□□□□□ -0.77
ATG4D-202ENST00000585437 APBA2Q99767 749 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 NUDT12Q9BQG2 462 aa10.21□□□□□ -0.77
ATG4D-202ENST00000585437 PAK6Q9NQU5 681 aaPredicted RBP10.21□□□□□ -0.77
ATG4D-202ENST00000585437 SLC15A5A6NIM6 579 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 SGSM2O43147 1006 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 RANBP6O60518 1105 aaKnown RBP10.2□□□□□ -0.78
ATG4D-202ENST00000585437 PLA2G6O60733 806 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 GJB1P08034 283 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 CCL5P13501 91 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 UBXN2AP68543 259 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 MAP2K5Q13163 448 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 MFSD6Q6ZSS7 791 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.2□□□□□ -0.78
ATG4D-202ENST00000585437 RIOX2Q8IUF8 465 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 PRPF38AQ8NAV1 312 aaKnown RBP10.2□□□□□ -0.78
ATG4D-202ENST00000585437 SLF1Q9BQI6 1058 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 RNF41Q9H4P4 317 aaPredicted RBP10.2□□□□□ -0.78
ATG4D-202ENST00000585437 MROH8Q9H579 483 aa10.2□□□□□ -0.78
ATG4D-202ENST00000585437 ZNF213O14771 459 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 STRNO43815 780 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 BMP3P12645 472 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 ERCC3P19447 782 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 EN2P19622 333 aaPredicted RBP10.19□□□□□ -0.78
ATG4D-202ENST00000585437 CYP2B6P20813 491 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 RGS2P41220 211 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 GJA8P48165 433 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 IMMTQ16891 758 aaKnown RBP10.19□□□□□ -0.78
ATG4D-202ENST00000585437 BMP2KLQ5H9B9 411 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 SLFN13Q68D06 897 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 RASGRP2Q7LDG7 609 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 UBE2Q1Q7Z7E8 422 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 TRMT44Q8IYL2 757 aaKnown RBP10.19□□□□□ -0.78
ATG4D-202ENST00000585437 ABRAQ8N0Z2 381 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 RUFY2Q8WXA3 655 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 UNC93B1Q9H1C4 597 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 SLC38A10Q9HBR0 1119 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 FEM1BQ9UK73 627 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
ATG4D-202ENST00000585437 RPTORQ8N122 1335 aa10.18□□□□□ -0.78
ATG4D-202ENST00000585437 SLC25A27O95847 323 aa10.18□□□□□ -0.78
ATG4D-202ENST00000585437 SNHG28P0DPA3 235 aa10.18□□□□□ -0.78
ATG4D-202ENST00000585437 TOP1P11387 765 aaKnown RBP10.18□□□□□ -0.78
ATG4D-202ENST00000585437 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms