RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ANO1Q5XXA6 986 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 CTR9Q6PD62 1173 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 SH2D4AQ9H788 454 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 KANSL2Q9H9L4 492 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 COG6Q9Y2V7 657 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 KBTBD13C9JR72 458 aa17.43■□□□□ 0.38
SDF2-202ENST00000585428 LRRC41Q15345 812 aa17.43■□□□□ 0.38
SDF2-202ENST00000585428 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.43■□□□□ 0.38
SDF2-202ENST00000585428 PRKAG2Q9UGJ0 569 aa17.43■□□□□ 0.38
SDF2-202ENST00000585428 NRBP1Q9UHY1 535 aa17.43■□□□□ 0.38
SDF2-202ENST00000585428 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
SDF2-202ENST00000585428 VWA5AO00534 786 aa17.42■□□□□ 0.38
SDF2-202ENST00000585428 ADCYAP1R1P41586 468 aa17.42■□□□□ 0.38
SDF2-202ENST00000585428 ZNF792Q3KQV3 632 aa17.42■□□□□ 0.38
SDF2-202ENST00000585428 RIOX2Q8IUF8 465 aa17.42■□□□□ 0.38
SDF2-202ENST00000585428 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.42■□□□□ 0.38
SDF2-202ENST00000585428 PUS7LQ9H0K6 701 aaKnown RBP17.42■□□□□ 0.38
SDF2-202ENST00000585428 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
SDF2-202ENST00000585428 DIS3Q9Y2L1 958 aaKnown RBP17.42■□□□□ 0.38
SDF2-202ENST00000585428 RLFQ13129 1914 aa17.42■□□□□ 0.38
SDF2-202ENST00000585428 TRIM43BA6NCK2 446 aa17.41■□□□□ 0.38
SDF2-202ENST00000585428 STAT3P40763 770 aa17.41■□□□□ 0.38
SDF2-202ENST00000585428 SHHQ15465 462 aa17.41■□□□□ 0.38
SDF2-202ENST00000585428 TRIM43Q96BQ3 446 aaPredicted RBP17.41■□□□□ 0.38
SDF2-202ENST00000585428 GUCD1Q96NT3 240 aa17.41■□□□□ 0.38
SDF2-202ENST00000585428 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
SDF2-202ENST00000585428 SLC4A4Q9Y6R1 1079 aa17.41■□□□□ 0.38
SDF2-202ENST00000585428 PGK2P07205 417 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 TRIM60Q495X7 471 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 FAM47AQ5JRC9 791 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 SH3RF1Q7Z6J0 888 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 AMOTL1Q8IY63 956 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 REPS2Q8NFH8 660 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 BADQ92934 168 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 FERMT2Q96AC1 680 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 MMP19Q99542 508 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 TINF2Q9BSI4 451 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
SDF2-202ENST00000585428 ZNF214Q9UL59 606 aaPredicted RBP17.4■□□□□ 0.38
SDF2-202ENST00000585428 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
SDF2-202ENST00000585428 TAL1P17542 331 aaPredicted RBP17.39■□□□□ 0.37
SDF2-202ENST00000585428 SBK1Q52WX2 424 aa17.39■□□□□ 0.37
SDF2-202ENST00000585428 C9orf50Q5SZB4 431 aa17.39■□□□□ 0.37
SDF2-202ENST00000585428 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
SDF2-202ENST00000585428 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
SDF2-202ENST00000585428 DDRGK1Q96HY6 314 aa17.39■□□□□ 0.37
SDF2-202ENST00000585428 STRBPQ96SI9 672 aaKnown RBP17.39■□□□□ 0.37
SDF2-202ENST00000585428 GOPCQ9HD26 462 aa17.39■□□□□ 0.37
SDF2-202ENST00000585428 PHF24Q9UPV7 400 aa17.39■□□□□ 0.37
SDF2-202ENST00000585428 ZNF236Q9UL36 1845 aa17.39■□□□□ 0.37
SDF2-202ENST00000585428 ZNF865P0CJ78 1059 aaPredicted RBP17.38■□□□□ 0.37
SDF2-202ENST00000585428 TLE2Q04725 743 aa17.38■□□□□ 0.37
SDF2-202ENST00000585428 KCTD2Q14681 263 aa17.38■□□□□ 0.37
SDF2-202ENST00000585428 PDLIM7Q9NR12 457 aa17.38■□□□□ 0.37
SDF2-202ENST00000585428 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 RARBP10826 455 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 ITGB8P26012 769 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 FAM83BQ5T0W9 1011 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 FAM161BQ96MY7 647 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 SEMA6BQ9H3T3 888 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 NYAP2Q9P242 653 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 UNC80Q8N2C7 3258 aa17.37■□□□□ 0.37
SDF2-202ENST00000585428 A0A0G2JMZ2 1700 aa17.36■□□□□ 0.37
SDF2-202ENST00000585428 FRMPD3Q5JV73 1810 aa17.36■□□□□ 0.37
SDF2-202ENST00000585428 PGK1P00558 417 aa17.36■□□□□ 0.37
SDF2-202ENST00000585428 RASA1P20936 1047 aa17.36■□□□□ 0.37
SDF2-202ENST00000585428 COPB2P35606 906 aa17.36■□□□□ 0.37
SDF2-202ENST00000585428 DIEXFQ68CQ4 756 aaKnown RBP17.36■□□□□ 0.37
SDF2-202ENST00000585428 RNF180Q86T96 592 aa17.36■□□□□ 0.37
SDF2-202ENST00000585428 PRDM5Q9NQX1 630 aaPredicted RBP17.36■□□□□ 0.37
SDF2-202ENST00000585428 ARPP21Q9UBL0 812 aaPredicted RBP17.36■□□□□ 0.37
SDF2-202ENST00000585428 NAV1Q8NEY1 1877 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 DNAJC25-GNG10A0A024R161 153 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 F5H6K3 240 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
SDF2-202ENST00000585428 SMAD3P84022 425 aaKnown RBP17.35■□□□□ 0.37
SDF2-202ENST00000585428 KLRC3Q07444 240 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 ZNF697Q5TEC3 545 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 MAMDC4Q6UXC1 1216 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 MSL3Q8N5Y2 521 aaKnown RBP17.35■□□□□ 0.37
SDF2-202ENST00000585428 PRPF38AQ8NAV1 312 aaKnown RBP17.35■□□□□ 0.37
SDF2-202ENST00000585428 TSEN34Q9BSV6 310 aaKnown RBP17.35■□□□□ 0.37
SDF2-202ENST00000585428 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 RIPK3Q9Y572 518 aa17.35■□□□□ 0.37
SDF2-202ENST00000585428 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
SDF2-202ENST00000585428 KIAA0355O15063 1070 aa17.34■□□□□ 0.37
SDF2-202ENST00000585428 ADAMTS4O75173 837 aa17.34■□□□□ 0.37
SDF2-202ENST00000585428 SNAI1O95863 264 aaPredicted RBP17.34■□□□□ 0.37
SDF2-202ENST00000585428 AKR1A1P14550 325 aa17.34■□□□□ 0.37
SDF2-202ENST00000585428 CCSAPQ6IQ19 270 aaPredicted RBP17.34■□□□□ 0.37
SDF2-202ENST00000585428 OSBP2Q969R2 916 aa17.34■□□□□ 0.37
SDF2-202ENST00000585428 MKL1Q969V6 931 aa17.34■□□□□ 0.37
SDF2-202ENST00000585428 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
SDF2-202ENST00000585428 CDX2Q99626 313 aaPredicted RBP17.34■□□□□ 0.37
SDF2-202ENST00000585428 SLF1Q9BQI6 1058 aa17.34■□□□□ 0.37
SDF2-202ENST00000585428 IGKV6D-41A0A0C4DH26 115 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms