RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 TIMP1P01033 207 aa17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 DSG3P32926 999 aa17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 TMEM240Q5SV17 173 aa17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 MMP19Q99542 508 aa17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 TINF2Q9BSI4 451 aa17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 PPP1R12CQ9BZL4 782 aa17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 TLR7Q9NYK1 1049 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-224ENST00000584672 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 CSF2RAP15509 400 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 ACLYP53396 1101 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 MFSD5Q6N075 450 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 ANKRD33Q7Z3H0 272 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 ABRAQ8N0Z2 381 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 TBX21Q9UL17 535 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
CSNK1D-224ENST00000584672 SYNRGQ9UMZ2 1314 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 MYH8P13535 1937 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 MYADML2A6NDP7 307 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 GNAI2P04899 355 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 ZNF865P0CJ78 1059 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 AKR1A1P14550 325 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 TFF2Q03403 129 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 PPIGQ13427 754 aaKnown RBP eCLIP17.21■□□□□ 0.351e-8■□□□□ 9.7
CSNK1D-224ENST00000584672 TMEM132BQ14DG7 1078 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 ZNF365Q70YC5 407 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
CSNK1D-224ENST00000584672 KCNA10Q16322 511 aa17.2■□□□□ 0.34
CSNK1D-224ENST00000584672 TOX2Q96NM4 488 aa17.2■□□□□ 0.34
CSNK1D-224ENST00000584672 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-224ENST00000584672 MSRAQ9UJ68 235 aa17.2■□□□□ 0.34
CSNK1D-224ENST00000584672 CYP2D6P10635 497 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 ZNF792Q3KQV3 632 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 VTI1AQ96AJ9 217 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 GPR108Q9NPR9 543 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 FBXO28Q9NVF7 368 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 NRBP1Q9UHY1 535 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 DBNLQ9UJU6 430 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 ZHX1Q9UKY1 873 aaPredicted RBP17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 YBX2Q9Y2T7 364 aaKnown RBP17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 REV3LO60673 3130 aa17.19■□□□□ 0.34
CSNK1D-224ENST00000584672 ROBO3Q96MS0 1386 aa17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 GABPAQ06546 454 aa17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 KCTD2Q14681 263 aa17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 RASIP1Q5U651 963 aa17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 TSEN34Q9BSV6 310 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 CXXC1Q9P0U4 656 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 CNPY2Q9Y2B0 182 aa17.18■□□□□ 0.34
CSNK1D-224ENST00000584672 SLC25A27O95847 323 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 KCNQ1P51787 676 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 SKIV2LQ15477 1246 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 RAB30Q15771 203 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 PSRC1Q6PGN9 363 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 TMEM199Q8N511 208 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 DYNLL2Q96FJ2 89 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 C1QTNF1Q9BXJ1 281 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 SLC28A3Q9HAS3 691 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 CHD7Q9P2D1 2997 aa17.17■□□□□ 0.34
CSNK1D-224ENST00000584672 AKR1B1P15121 316 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 CYP2C18P33260 490 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 ICA1Q05084 483 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 TMEM179Q6ZVK1 233 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 CERS3Q8IU89 383 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 KLHDC9Q8NEP7 349 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 GLT1D1Q96MS3 346 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 TSPYL2Q9H2G4 693 aaPredicted RBP17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 EPHX3Q9H6B9 360 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 ARHGEF10LQ9HCE6 1279 aa17.16■□□□□ 0.34
CSNK1D-224ENST00000584672 MAGEB6P1A0A0J9YX57 407 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 MOXD2PA6NHM9 499 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 RAD21O60216 631 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 BCAR3O75815 825 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 ASGR1P07306 291 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 C6orf222P0C671 652 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 BMP1P13497 986 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 RABGGTBP53611 331 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 CCSAPQ6IQ19 270 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 SDR42E1Q8WUS8 393 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 LRFN3Q9BTN0 628 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 MROH7Q68CQ1 1323 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 MCM3APO60318 1980 aa17.15■□□□□ 0.34
CSNK1D-224ENST00000584672 WDR46O15213 610 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-224ENST00000584672 ADCY6O43306 1168 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms