RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 ICA1Q05084 483 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
PGAP3-209ENST00000584620 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 SPICE1Q8N0Z3 855 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 ATXN2LQ8WWM7 1075 aaKnown RBP13.03□□□□□ -0.32
PGAP3-209ENST00000584620 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
PGAP3-209ENST00000584620 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.32
PGAP3-209ENST00000584620 SPATC1LQ9H0A9 340 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 VCPKMTQ9H867 229 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 IVNS1ABPQ9Y6Y0 642 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 MYO9BQ13459 2157 aa13.03□□□□□ -0.32
PGAP3-209ENST00000584620 TCF20Q9UGU0 1960 aaKnown RBP13.02□□□□□ -0.32
PGAP3-209ENST00000584620 TRIM43BA6NCK2 446 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 COBLO75128 1261 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 ERCC3P19447 782 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 ADORA2AP29274 412 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 EPHB4P54760 987 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 ATP2B2Q01814 1243 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 CCDC85BQ15834 202 aaPredicted RBP13.02□□□□□ -0.33
PGAP3-209ENST00000584620 TRIM60Q495X7 471 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 CTR9Q6PD62 1173 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 SLC39A5Q6ZMH5 540 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 SHCBP1Q8NEM2 672 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 LPAR1Q92633 364 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.33
PGAP3-209ENST00000584620 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 NECAB3Q96P71 396 aaPredicted RBP13.02□□□□□ -0.33
PGAP3-209ENST00000584620 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.02□□□□□ -0.33
PGAP3-209ENST00000584620 LRRCC1Q9C099 1032 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
PGAP3-209ENST00000584620 ZNF576Q9H609 170 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
PGAP3-209ENST00000584620 NAV1Q8NEY1 1877 aa13.02□□□□□ -0.33
PGAP3-209ENST00000584620 RLFQ13129 1914 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 DNM1LO00429 736 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 STRNO43815 780 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 MYCNP04198 464 aaPredicted RBP13.01□□□□□ -0.33
PGAP3-209ENST00000584620 CYBAP13498 195 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 OLFML2BQ68BL8 750 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 MB21D1Q8N884 522 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 PDLIM7Q9NR12 457 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
PGAP3-209ENST00000584620 WDR46O15213 610 aaKnown RBP13□□□□□ -0.33
PGAP3-209ENST00000584620 FLOT1O75955 427 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
PGAP3-209ENST00000584620 DNAJB2P25686 324 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 ITGB8P26012 769 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 MRPS5P82675 430 aaKnown RBP13□□□□□ -0.33
PGAP3-209ENST00000584620 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 ANO1Q5XXA6 986 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 DPP9Q86TI2 863 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 STRBPQ96SI9 672 aaKnown RBP13□□□□□ -0.33
PGAP3-209ENST00000584620 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 ADAMTS5Q9UNA0 930 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 NCOR1O75376 2440 aa13□□□□□ -0.33
PGAP3-209ENST00000584620 GSG1L2A8MUP6 293 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 MSCO60682 206 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 PLS1Q14651 629 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 TSHZ3Q63HK5 1081 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 NCAPG2Q86XI2 1143 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 ABRAQ8N0Z2 381 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 IL27Q8NEV9 243 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 MROH8Q9H579 483 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 ECHDC1Q9NTX5 307 aa12.99□□□□□ -0.33
PGAP3-209ENST00000584620 SYNGAP1Q96PV0 1343 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 PRAMEF19Q5SWL8 479 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 ZSCAN25Q6NSZ9 544 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 KBTBD3Q8NAB2 608 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 FERMT2Q96AC1 680 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 TIFAQ96CG3 184 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 GAS2L1Q99501 681 aaPredicted RBP12.98□□□□□ -0.33
PGAP3-209ENST00000584620 C1QTNF1Q9BXJ1 281 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 PRDM12Q9H4Q4 367 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 A0A0G2JMZ2 1700 aa12.98□□□□□ -0.33
PGAP3-209ENST00000584620 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
PGAP3-209ENST00000584620 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
PGAP3-209ENST00000584620 VWA5AO00534 786 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 SEPT4O43236 478 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 RASA1P20936 1047 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
PGAP3-209ENST00000584620 AMOTL1Q8IY63 956 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 MAML3Q96JK9 1138 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 LRFN3Q9BTN0 628 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 EPB41L4AQ9HCS5 686 aaPredicted RBP12.97□□□□□ -0.33
PGAP3-209ENST00000584620 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
PGAP3-209ENST00000584620 ZNF214Q9UL59 606 aaPredicted RBP12.97□□□□□ -0.33
PGAP3-209ENST00000584620 PPP1R9AQ9ULJ8 1098 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 HCN4Q9Y3Q4 1203 aa12.97□□□□□ -0.33
PGAP3-209ENST00000584620 KBTBD13C9JR72 458 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms