RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 APBA2Q99767 749 aa13.56□□□□□ -0.24
CCDC47-206ENST00000584112 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
CCDC47-206ENST00000584112 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
CCDC47-206ENST00000584112 ASCC2Q9H1I8 757 aaPredicted RBP13.56□□□□□ -0.24
CCDC47-206ENST00000584112 MORF4L1Q9UBU8 362 aa13.56□□□□□ -0.24
CCDC47-206ENST00000584112 DBNLQ9UJU6 430 aaKnown RBP13.56□□□□□ -0.24
CCDC47-206ENST00000584112 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
CCDC47-206ENST00000584112 HMMRO75330 724 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 CYP2E1P05181 493 aaPredicted RBP13.55□□□□□ -0.24
CCDC47-206ENST00000584112 IL9P15248 144 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 ZAP70P43403 619 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 MORN1Q5T089 497 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 ASCL5Q7RTU5 278 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
CCDC47-206ENST00000584112 ARRDC4Q8NCT1 418 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 EAF2Q96CJ1 260 aaPredicted RBP13.55□□□□□ -0.24
CCDC47-206ENST00000584112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC47-206ENST00000584112 TXNRD2Q9NNW7 524 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 AATFQ9NY61 560 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC47-206ENST00000584112 RCAN3Q9UKA8 241 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
CCDC47-206ENST00000584112 MSCO60682 206 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
CCDC47-206ENST00000584112 PPP4CP60510 307 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 C1orf53Q5VUE5 145 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
CCDC47-206ENST00000584112 AACSQ86V21 672 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 SLC44A5Q8NCS7 719 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
CCDC47-206ENST00000584112 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 PORCNQ9H237 461 aa13.54□□□□□ -0.24
CCDC47-206ENST00000584112 DHX36Q9H2U1 1008 aaKnown RBP13.54□□□□□ -0.24
CCDC47-206ENST00000584112 TLR7Q9NYK1 1049 aaKnown RBP13.54□□□□□ -0.24
CCDC47-206ENST00000584112 HERC5Q9UII4 1024 aaKnown RBP13.54□□□□□ -0.24
CCDC47-206ENST00000584112 CYP2C19P33261 490 aa13.53□□□□□ -0.24
CCDC47-206ENST00000584112 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
CCDC47-206ENST00000584112 GPR142Q7Z601 462 aa13.53□□□□□ -0.24
CCDC47-206ENST00000584112 PI4KBQ9UBF8 816 aa13.53□□□□□ -0.24
CCDC47-206ENST00000584112 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
CCDC47-206ENST00000584112 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
CCDC47-206ENST00000584112 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.24
CCDC47-206ENST00000584112 IDH1O75874 414 aaKnown RBP13.52□□□□□ -0.25
CCDC47-206ENST00000584112 CSF2RAP15509 400 aa13.52□□□□□ -0.25
CCDC47-206ENST00000584112 CYP7A1P22680 504 aa13.52□□□□□ -0.25
CCDC47-206ENST00000584112 CLASRPQ8N2M8 674 aaKnown RBP13.52□□□□□ -0.25
CCDC47-206ENST00000584112 RHPN1Q8TCX5 695 aa13.52□□□□□ -0.25
CCDC47-206ENST00000584112 KIF1BPQ96EK5 621 aa13.52□□□□□ -0.25
CCDC47-206ENST00000584112 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.25
CCDC47-206ENST00000584112 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
CCDC47-206ENST00000584112 USP24Q9UPU5 2620 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 FLT1P17948 1338 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 FAM196BA6NMK8 535 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 TIMP1P01033 207 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 CAP2P40123 477 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 PPIGQ13427 754 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC47-206ENST00000584112 LRRC41Q15345 812 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 Q3C1V9 767 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 ADGRA1Q86SQ6 560 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 MAPKAPK5Q8IW41 473 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 TGFBRAP1Q8WUH2 860 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 TRIM34Q9BYJ4 488 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 ALG13Q9NP73 1137 aaKnown RBP13.51□□□□□ -0.25
CCDC47-206ENST00000584112 SPTBN2O15020 2390 aa13.51□□□□□ -0.25
CCDC47-206ENST00000584112 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 MAP2K5Q13163 448 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
CCDC47-206ENST00000584112 MFSD5Q6N075 450 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 PLEKHH3Q7Z736 793 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 FOXP4Q8IVH2 680 aaPredicted RBP13.5□□□□□ -0.25
CCDC47-206ENST00000584112 PROCA1Q8NCQ7 364 aaPredicted RBP13.5□□□□□ -0.25
CCDC47-206ENST00000584112 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
CCDC47-206ENST00000584112 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
CCDC47-206ENST00000584112 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 IL1RAPL2Q9NP60 686 aa13.5□□□□□ -0.25
CCDC47-206ENST00000584112 UNC79Q9P2D8 2635 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 IFIT2P09913 472 aaKnown RBP13.49□□□□□ -0.25
CCDC47-206ENST00000584112 CYBAP13498 195 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 MAPK4P31152 587 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 HMGCS2P54868 508 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
CCDC47-206ENST00000584112 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 GPRC5AQ8NFJ5 357 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC47-206ENST00000584112 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 ZNF292O60281 2723 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 SMCHD1A6NHR9 2005 aa13.49□□□□□ -0.25
CCDC47-206ENST00000584112 APBB1O00213 710 aa13.48□□□□□ -0.25
CCDC47-206ENST00000584112 ASNSP08243 561 aa13.48□□□□□ -0.25
CCDC47-206ENST00000584112 DYNLL1P63167 89 aaKnown RBP13.48□□□□□ -0.25
CCDC47-206ENST00000584112 SPP2Q13103 211 aa13.48□□□□□ -0.25
CCDC47-206ENST00000584112 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC47-206ENST00000584112 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms