RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ATP11BQ9Y2G3 1177 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 TMX2Q9Y320 296 aa11.65□□□□□ -0.54
CDK5RAP3-227ENST00000583352 RLFQ13129 1914 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SLC25A27O95847 323 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 FCER1AP12319 257 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ATP5JP18859 108 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 CDK8P49336 464 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 NUCB1Q02818 461 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 C12orf60Q5U649 245 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ANO1Q5XXA6 986 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SLC39A5Q6ZMH5 540 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 CLEC10AQ8IUN9 316 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SIAH1Q8IUQ4 282 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 DCTPP1Q9H773 170 aa11.64□□□□□ -0.55
CDK5RAP3-227ENST00000583352 BAZ2AQ9UIF9 1905 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 USP17L21D6R901 530 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 UBE3CQ15386 1083 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 FAM109BQ6ICB4 259 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ZSCAN25Q6NSZ9 544 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 MAML3Q96JK9 1138 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 HAUS7Q99871 368 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 KANSL2Q9H9L4 492 aa11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PRDM5Q9NQX1 630 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-227ENST00000583352 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 EEF2P13639 858 aaKnown RBP11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 KCTD2Q14681 263 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 TMEM132BQ14DG7 1078 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 LRRC41Q15345 812 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 TRIM60Q495X7 471 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PRAMEF19Q5SWL8 479 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 MMP19Q99542 508 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 NRBP1Q9UHY1 535 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
CDK5RAP3-227ENST00000583352 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PARP14Q460N5 1801 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SMIM22K7EJ46 135 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 RAD21O60216 631 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 COPB2P35606 906 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ADCYAP1R1P41586 468 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SNX17Q15036 470 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 FAM47AQ5JRC9 791 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ZNF697Q5TEC3 545 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PPP1R9AQ9ULJ8 1098 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ADAMTS5Q9UNA0 930 aa11.61□□□□□ -0.55
CDK5RAP3-227ENST00000583352 MYH7P12883 1935 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 VWA5AO00534 786 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PGK2P07205 417 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 RARBP10826 455 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 STAT3P40763 770 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 C8orf34Q49A92 452 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 FAM83BQ5T0W9 1011 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 C1orf53Q5VUE5 145 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 CTR9Q6PD62 1173 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 CHD1LQ86WJ1 897 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 FERMT2Q96AC1 680 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 GUCD1Q96NT3 240 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 TINF2Q9BSI4 451 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 XPNPEP3Q9NQH7 507 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PDLIM7Q9NR12 457 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 FBXO28Q9NVF7 368 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PHF24Q9UPV7 400 aa11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 DIS3Q9Y2L1 958 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ZNFX1Q9P2E3 1918 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 COL11A1P12107 1806 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-227ENST00000583352 CHGBP05060 677 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 SHHQ15465 462 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ZNF792Q3KQV3 632 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ANKRD45Q5TZF3 282 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 RNF180Q86T96 592 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 BADQ92934 168 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 FAM161BQ96MY7 647 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
CDK5RAP3-227ENST00000583352 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 PLXNA1Q9UIW2 1896 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 AKR1A1P14550 325 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TLE2Q04725 743 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SBK1Q52WX2 424 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 C9orf50Q5SZB4 431 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SH3RF1Q7Z6J0 888 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 REPS2Q8NFH8 660 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZNF214Q9UL59 606 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TRIM43BA6NCK2 446 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 SMARCA5O60264 1052 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 PGK1P00558 417 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 CLTBP09497 229 aa11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 ZNF865P0CJ78 1059 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-227ENST00000583352 GIMAP6Q6P9H5 292 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms