RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PGK2P07205 417 aa19.51■□□□□ 0.71
SREBF1-221ENST00000583080 ITGB8P26012 769 aa19.51■□□□□ 0.71
SREBF1-221ENST00000583080 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
SREBF1-221ENST00000583080 HSP90AB4PQ58FF6 505 aa19.51■□□□□ 0.71
SREBF1-221ENST00000583080 CLASRPQ8N2M8 674 aaKnown RBP19.51■□□□□ 0.71
SREBF1-221ENST00000583080 LENG1Q96BZ8 264 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-221ENST00000583080 CDH23Q9H251 3354 aa19.51■□□□□ 0.71
SREBF1-221ENST00000583080 SMCHD1A6NHR9 2005 aa19.51■□□□□ 0.71
SREBF1-221ENST00000583080 PLXNA1Q9UIW2 1896 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 FCER1AP12319 257 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 TAL1P17542 331 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-221ENST00000583080 ADD2P35612 726 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 CDK8P49336 464 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 TLE2Q04725 743 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 C1orf53Q5VUE5 145 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 KIF1BPQ96EK5 621 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 MMP19Q99542 508 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 TTYH1Q9H313 450 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-221ENST00000583080 SEMA6BQ9H3T3 888 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 SH2D4AQ9H788 454 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 PHF24Q9UPV7 400 aa19.5■□□□□ 0.71
SREBF1-221ENST00000583080 VCANP13611 3396 aa19.49■□□□□ 0.71
SREBF1-221ENST00000583080 ROBO3Q96MS0 1386 aa19.49■□□□□ 0.71
SREBF1-221ENST00000583080 PGK1P00558 417 aa19.49■□□□□ 0.71
SREBF1-221ENST00000583080 IFIT2P09913 472 aaKnown RBP19.49■□□□□ 0.71
SREBF1-221ENST00000583080 EEF2P13639 858 aaKnown RBP19.49■□□□□ 0.71
SREBF1-221ENST00000583080 C12orf60Q5U649 245 aa19.49■□□□□ 0.71
SREBF1-221ENST00000583080 XPNPEP3Q9NQH7 507 aa19.49■□□□□ 0.71
SREBF1-221ENST00000583080 PAG1Q9NWQ8 432 aa19.49■□□□□ 0.71
SREBF1-221ENST00000583080 ADAMTS5Q9UNA0 930 aa19.49■□□□□ 0.71
SREBF1-221ENST00000583080 SLC25A27O95847 323 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 RARBP10826 455 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 EPHB4P54760 987 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 C16orf86Q6ZW13 317 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 RIOX2Q8IUF8 465 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 SIRT2Q8IXJ6 389 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 MAFAQ8NHW3 353 aaPredicted RBP19.48■□□□□ 0.71
SREBF1-221ENST00000583080 MYLIPQ8WY64 445 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 BOLA2Q9H3K6 86 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 ATP8A2Q9NTI2 1148 aa19.48■□□□□ 0.71
SREBF1-221ENST00000583080 MYH7P12883 1935 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 GREB1LQ9C091 1923 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-221ENST00000583080 USP17L12C9JPN9 530 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 USP17L21D6R901 530 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 SMAD3P84022 425 aaKnown RBP19.47■□□□□ 0.71
SREBF1-221ENST00000583080 ZNF792Q3KQV3 632 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 REPS2Q8NFH8 660 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 CCDC17Q96LX7 622 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 TINF2Q9BSI4 451 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 NRBP1Q9UHY1 535 aa19.47■□□□□ 0.71
SREBF1-221ENST00000583080 ZNF214Q9UL59 606 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-221ENST00000583080 A0A1W2PQ45 241 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-221ENST00000583080 A0A1W2PQY0 241 aa19.46■□□□□ 0.71
SREBF1-221ENST00000583080 VWA5AO00534 786 aa19.46■□□□□ 0.71
SREBF1-221ENST00000583080 CLTBP09497 229 aa19.46■□□□□ 0.71
SREBF1-221ENST00000583080 ZNF865P0CJ78 1059 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-221ENST00000583080 FAM83BQ5T0W9 1011 aa19.46■□□□□ 0.71
SREBF1-221ENST00000583080 PPP1R9AQ9ULJ8 1098 aa19.46■□□□□ 0.71
SREBF1-221ENST00000583080 ZBED9Q6R2W3 1325 aa19.46■□□□□ 0.71
SREBF1-221ENST00000583080 RAD21O60216 631 aa19.45■□□□□ 0.7
SREBF1-221ENST00000583080 PQBP1O60828 265 aaKnown RBP19.45■□□□□ 0.7
SREBF1-221ENST00000583080 STAT3P40763 770 aa19.45■□□□□ 0.7
SREBF1-221ENST00000583080 KCTD2Q14681 263 aa19.45■□□□□ 0.7
SREBF1-221ENST00000583080 RNPC3Q96LT9 517 aaKnown RBP19.45■□□□□ 0.7
SREBF1-221ENST00000583080 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.45■□□□□ 0.7
SREBF1-221ENST00000583080 SPTBN5Q9NRC6 3674 aaKnown RBP19.45■□□□□ 0.7
SREBF1-221ENST00000583080 PRUNE2Q8WUY3 3088 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 ADAMTS4O75173 837 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 ATP5JP18859 108 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 CTR9Q6PD62 1173 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 RNF180Q86T96 592 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 NUP88Q99567 741 aaPredicted RBP19.44■□□□□ 0.7
SREBF1-221ENST00000583080 HAUS7Q99871 368 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.44■□□□□ 0.71e-11■■■□□ 18.6
SREBF1-221ENST00000583080 KANSL2Q9H9L4 492 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 GOPCQ9HD26 462 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 DIS3Q9Y2L1 958 aaKnown RBP19.44■□□□□ 0.7
SREBF1-221ENST00000583080 TACC3Q9Y6A5 838 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 SLC4A4Q9Y6R1 1079 aa19.44■□□□□ 0.7
SREBF1-221ENST00000583080 KIAA0355O15063 1070 aa19.43■□□□□ 0.7
SREBF1-221ENST00000583080 AKR1A1P14550 325 aa19.43■□□□□ 0.7
SREBF1-221ENST00000583080 FOSL2P15408 326 aa19.43■□□□□ 0.7
SREBF1-221ENST00000583080 UBE3CQ15386 1083 aa19.43■□□□□ 0.7
SREBF1-221ENST00000583080 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-221ENST00000583080 AMOTL1Q8IY63 956 aa19.43■□□□□ 0.7
SREBF1-221ENST00000583080 PUS7LQ9H0K6 701 aaKnown RBP19.43■□□□□ 0.7
SREBF1-221ENST00000583080 SYNRGQ9UMZ2 1314 aa19.43■□□□□ 0.7
SREBF1-221ENST00000583080 HMMRO75330 724 aa19.42■□□□□ 0.7
SREBF1-221ENST00000583080 RAG1P15918 1043 aa19.42■□□□□ 0.7
SREBF1-221ENST00000583080 MYADML2A6NDP7 307 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 RAB11FIP3O75154 756 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 FPGSQ05932 587 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 SLF1Q9BQI6 1058 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 TMEM39AQ9NV64 488 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 CNPY2Q9Y2B0 182 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 COG6Q9Y2V7 657 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 RIPK3Q9Y572 518 aa19.41■□□□□ 0.7
SREBF1-221ENST00000583080 SNAI1O95863 264 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-221ENST00000583080 COPB2P35606 906 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms