RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 KIF3AQ9Y496 699 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 ZHX2Q9Y6X8 837 aa13.96□□□□□ -0.17
CCDC57-216ENST00000582885 COL11A1P12107 1806 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-216ENST00000582885 PTPDC1A2A3K4 754 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 KLRF2D3W0D1 207 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 PLA2G6O60733 806 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 TOMM70O94826 608 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 CELF2O95319 508 aaKnown RBP13.95□□□□□ -0.18
CCDC57-216ENST00000582885 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-216ENST00000582885 DDIT3P35638 169 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 SLC1A4P43007 532 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 BACE1P56817 501 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 FMR1Q06787 632 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC57-216ENST00000582885 SPP2Q13103 211 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 USP17L2Q6R6M4 530 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 MOB2Q70IA6 237 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 TRIM22Q8IYM9 498 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 STAG2Q8N3U4 1231 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 SRBD1Q8N5C6 995 aaKnown RBP13.95□□□□□ -0.18
CCDC57-216ENST00000582885 C12orf42Q96LP6 360 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 FEZ1Q99689 392 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 ZNF408Q9H9D4 720 aa13.95□□□□□ -0.18
CCDC57-216ENST00000582885 UBE2Q2LH0YL09 131 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 CXCL11O14625 94 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 WDR46O15213 610 aaKnown RBP13.94□□□□□ -0.18
CCDC57-216ENST00000582885 PRPF3O43395 683 aaKnown RBP13.94□□□□□ -0.18
CCDC57-216ENST00000582885 JAK2O60674 1132 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 PLEKHA8P1O95397 391 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 BMP3P12645 472 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 PDCP20941 246 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 YY1P25490 414 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 GJB2P29033 226 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
CCDC57-216ENST00000582885 PPIL2Q13356 520 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 SH3D19Q5HYK7 790 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 CST9Q5W186 159 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 BTNL9Q6UXG8 535 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 CCDC84Q86UT8 332 aaPredicted RBP13.94□□□□□ -0.18
CCDC57-216ENST00000582885 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 RIOX1Q9H6W3 641 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 ELP3Q9H9T3 547 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
CCDC57-216ENST00000582885 CIZ1Q9ULV3 898 aaPredicted RBP13.94□□□□□ -0.18
CCDC57-216ENST00000582885 CNTNAP5Q8WYK1 1306 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 DEXIO95424 95 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
CCDC57-216ENST00000582885 MTMR2Q13614 643 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 KIAA1755Q5JYT7 1200 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 WASF1Q92558 559 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 SLC10A4Q96EP9 437 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 CLMNQ96JQ2 1002 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 ORC3Q9UBD5 711 aaPredicted RBP13.93□□□□□ -0.18
CCDC57-216ENST00000582885 KCNH4Q9UQ05 1017 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
CCDC57-216ENST00000582885 TCHHQ07283 1943 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 CYTH3O43739 400 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 GOLGA8HP0CJ92 632 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
CCDC57-216ENST00000582885 FSTL1Q12841 308 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 RASGRP2Q7LDG7 609 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 FAM160B2Q86V87 743 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 FAM177A1Q8N128 213 aaPredicted RBP13.92□□□□□ -0.18
CCDC57-216ENST00000582885 FAM184AQ8NB25 1140 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 CHURC1Q8WUH1 139 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 PHKBQ93100 1093 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 MTMR8Q96EF0 704 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 SLC26A6Q9BXS9 759 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 EMILIN3Q9NT22 766 aa13.92□□□□□ -0.18
CCDC57-216ENST00000582885 FRMPD2Q68DX3 1309 aaPredicted RBP13.91□□□□□ -0.18
CCDC57-216ENST00000582885 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 STAT2P52630 851 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 SLC35G1Q2M3R5 365 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 SPICE1Q8N0Z3 855 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 CMTR1Q8N1G2 835 aaKnown RBP13.91□□□□□ -0.18
CCDC57-216ENST00000582885 ZNF784Q8NCA9 323 aaPredicted RBP13.91□□□□□ -0.18
CCDC57-216ENST00000582885 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 DDX11Q96FC9 970 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 TMOD4Q9NZQ9 345 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
CCDC57-216ENST00000582885 V9GY48 417 aaPredicted RBP13.91□□□□□ -0.18
CCDC57-216ENST00000582885 A0A0G2JMZ2 1700 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 A0A0G2JLL6 359 aaPredicted RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 IRF6O14896 467 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 RAD21O60216 631 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 VCAM1P19320 739 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 SYT1P21579 422 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 HMGCS2P54868 508 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 NUCB2P80303 420 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 ZYXQ15942 572 aaKnown RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 PKN1Q16512 942 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 PFKFB3Q16875 520 aaPredicted RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 FAM83BQ5T0W9 1011 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 LARP1BQ659C4 914 aaKnown RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 TTBK2Q6IQ55 1244 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 PRRT2Q7Z6L0 340 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms