RNA–Protein interactions for RNA: ENST00000582681.1

NUP85-218, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-218ENST00000582681 FBXL16Q8N461 479 aa9.19□□□□□ -0.94
NUP85-218ENST00000582681 ENAHQ8N8S7 591 aaPredicted RBP9.19□□□□□ -0.94
NUP85-218ENST00000582681 SHCBP1Q8NEM2 672 aa9.19□□□□□ -0.94
NUP85-218ENST00000582681 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
NUP85-218ENST00000582681 TRIM47Q96LD4 638 aa9.19□□□□□ -0.94
NUP85-218ENST00000582681 TMEM47Q9BQJ4 181 aa9.19□□□□□ -0.94
NUP85-218ENST00000582681 CPA4Q9UI42 421 aa9.19□□□□□ -0.94
NUP85-218ENST00000582681 PPP1R9AQ9ULJ8 1098 aa9.19□□□□□ -0.94
NUP85-218ENST00000582681 DOCK3Q8IZD9 2030 aa9.19□□□□□ -0.94
NUP85-218ENST00000582681 B4E1Z4 1266 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 VWA5AO00534 786 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 REC8O95072 547 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 IGHA2P01877 340 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 COL11A1P12107 1806 aaPredicted RBP9.18□□□□□ -0.94
NUP85-218ENST00000582681 HSPA4P34932 840 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 ANTXR2P58335 489 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 ERVK-9P63128 1117 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 ERVK-24P63145 666 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 IRF5Q13568 498 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 ARHGEF6Q15052 776 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 ZYXQ15942 572 aaKnown RBP9.18□□□□□ -0.94
NUP85-218ENST00000582681 RBBP6Q7Z6E9 1792 aaKnown RBP9.18□□□□□ -0.94
NUP85-218ENST00000582681 IQCA1Q86XH1 822 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 NCOA7Q8NI08 942 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 DCAF4Q8WV16 495 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 ZSCAN10Q96SZ4 725 aaPredicted RBP9.18□□□□□ -0.94
NUP85-218ENST00000582681 ANO2Q9NQ90 1003 aa9.18□□□□□ -0.94
NUP85-218ENST00000582681 ZNF214Q9UL59 606 aaPredicted RBP9.18□□□□□ -0.94
NUP85-218ENST00000582681 TNKSO95271 1327 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 PDHBP11177 359 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 MAPK4P31152 587 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 OAZ1P54368 228 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 FAM83BQ5T0W9 1011 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 FBXO46Q6PJ61 603 aaPredicted RBP9.17□□□□□ -0.94
NUP85-218ENST00000582681 CYB5R4Q7L1T6 521 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 SPICE1Q8N0Z3 855 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 STK11IPQ8N1F8 1099 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 LRRC47Q8N1G4 583 aaKnown RBP9.17□□□□□ -0.94
NUP85-218ENST00000582681 ANKRD13CQ8N6S4 541 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 PRPF38AQ8NAV1 312 aaKnown RBP9.17□□□□□ -0.94
NUP85-218ENST00000582681 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 CD99L2Q8TCZ2 262 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 IGDCC4Q8TDY8 1250 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 USP6NLQ92738 828 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 MAP3K14Q99558 947 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 ARHGAP39Q9C0H5 1083 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 BTBD7Q9P203 1132 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 SRRDQ9UH36 339 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 GJD2Q9UKL4 321 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 STX8Q9UNK0 236 aa9.17□□□□□ -0.94
NUP85-218ENST00000582681 FLOT1O75955 427 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 HOXC6P09630 235 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 BMP3P12645 472 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 XRCC5P13010 732 aaKnown RBP9.16□□□□□ -0.94
NUP85-218ENST00000582681 COPB2P35606 906 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 LIFRP42702 1097 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 STAT2P52630 851 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 FCGRTP55899 365 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 EXOSC10Q01780 885 aaKnown RBP9.16□□□□□ -0.94
NUP85-218ENST00000582681 ZNF543Q08ER8 600 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 TRDNQ13061 729 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 COL9A3Q14050 684 aaPredicted RBP9.16□□□□□ -0.94
NUP85-218ENST00000582681 KRT32Q14532 448 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 Q3C1V9 767 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 GLIPR1L2Q4G1C9 344 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 GPATCH4Q5T3I0 446 aaKnown RBP9.16□□□□□ -0.94
NUP85-218ENST00000582681 SLFN13Q68D06 897 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 SGMS1Q86VZ5 419 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 RIOX2Q8IUF8 465 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 RASEFQ8IZ41 740 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 ABRAQ8N0Z2 381 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 ARMC5Q96C12 935 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 ATG4CQ96DT6 458 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 SLF1Q9BQI6 1058 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 USP26Q9BXU7 913 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 AGXT2Q9BYV1 514 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 TANGO6Q9C0B7 1094 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 MCOLN1Q9GZU1 580 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 MAF1Q9H063 256 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 SPATC1LQ9H0A9 340 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 EFCC1Q9HA90 598 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 SLC38A10Q9HBR0 1119 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 FBXO28Q9NVF7 368 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 PTPN22Q9Y2R2 807 aa9.16□□□□□ -0.94
NUP85-218ENST00000582681 NID2Q14112 1375 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 ZNF536O15090 1300 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 EIF5BO60841 1220 aaKnown RBP9.15□□□□□ -0.94
NUP85-218ENST00000582681 HOXD10P28358 340 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 SLC1A4P43007 532 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 PSMC4P43686 418 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 RCAN1P53805 252 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 CCNA1P78396 465 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 ATP2B2Q01814 1243 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 TROAPQ12815 778 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 KIF22Q14807 665 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 TMEM132BQ14DG7 1078 aa9.15□□□□□ -0.94
NUP85-218ENST00000582681 RRP12Q5JTH9 1297 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms