RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 SOCS4Q8WXH5 440 aa22.25■■□□□ 1.15
LIMS2-218ENST00000582671 MOV10L1Q9BXT6 1211 aaKnown RBP22.25■■□□□ 1.15
LIMS2-218ENST00000582671 ADAMTS5Q9UNA0 930 aa22.25■■□□□ 1.15
LIMS2-218ENST00000582671 GJB1P08034 283 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 FGRP09769 529 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 WDR78Q5VTH9 848 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 LRRC47Q8N1G4 583 aaKnown RBP22.24■■□□□ 1.15
LIMS2-218ENST00000582671 NBPF3Q9H094 633 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 SPATC1LQ9H0A9 340 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 DIAPH3Q9NSV4 1193 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 ZMYM6O95789 1325 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 PLXNA1Q9UIW2 1896 aa22.24■■□□□ 1.15
LIMS2-218ENST00000582671 TTLL1O95922 423 aa22.23■■□□□ 1.15
LIMS2-218ENST00000582671 HMGCRP04035 888 aa22.23■■□□□ 1.15
LIMS2-218ENST00000582671 XRCC5P13010 732 aaKnown RBP22.23■■□□□ 1.15
LIMS2-218ENST00000582671 PTPREP23469 700 aa22.23■■□□□ 1.15
LIMS2-218ENST00000582671 IL17RBQ9NRM6 502 aa22.23■■□□□ 1.15
LIMS2-218ENST00000582671 FRMPD3Q5JV73 1810 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 ORC4O43929 436 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 NMT2O60551 498 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 RGS2P41220 211 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 GJA8P48165 433 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 HAND2P61296 217 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 MAP2K5Q13163 448 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 TMEM132BQ14DG7 1078 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 CCL14Q16627 93 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 MB21D1Q8N884 522 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 NKX2-3Q8TAU0 364 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 IL25Q9H293 177 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 CWC22Q9HCG8 908 aaKnown RBP22.22■■□□□ 1.15
LIMS2-218ENST00000582671 PPP1R9AQ9ULJ8 1098 aa22.22■■□□□ 1.15
LIMS2-218ENST00000582671 SLC15A5A6NIM6 579 aa22.21■■□□□ 1.15
LIMS2-218ENST00000582671 TSPY2A6NKD2 308 aa22.21■■□□□ 1.15
LIMS2-218ENST00000582671 HIP1O00291 1037 aa22.21■■□□□ 1.15
LIMS2-218ENST00000582671 ERCC3P19447 782 aa22.21■■□□□ 1.15
LIMS2-218ENST00000582671 PLS1Q14651 629 aa22.21■■□□□ 1.15
LIMS2-218ENST00000582671 REPS2Q8NFH8 660 aa22.21■■□□□ 1.15
LIMS2-218ENST00000582671 U2AF1L4Q8WU68 220 aaKnown RBP22.21■■□□□ 1.15
LIMS2-218ENST00000582671 PAK6Q9NQU5 681 aaPredicted RBP22.21■■□□□ 1.15
LIMS2-218ENST00000582671 SYNPO2Q9UMS6 1093 aa22.21■■□□□ 1.15
LIMS2-218ENST00000582671 VWA5AO00534 786 aa22.2■■□□□ 1.14
LIMS2-218ENST00000582671 RANBP6O60518 1105 aaKnown RBP22.2■■□□□ 1.14
LIMS2-218ENST00000582671 MFAP1P55081 439 aaKnown RBP22.2■■□□□ 1.14
LIMS2-218ENST00000582671 GRB14Q14449 540 aa22.2■■□□□ 1.14
LIMS2-218ENST00000582671 GMCL1P1Q8NEA9 526 aa22.2■■□□□ 1.14
LIMS2-218ENST00000582671 SHCBP1Q8NEM2 672 aa22.2■■□□□ 1.14
LIMS2-218ENST00000582671 APBA2Q99767 749 aa22.2■■□□□ 1.14
LIMS2-218ENST00000582671 SGPL1O95470 568 aa22.19■■□□□ 1.14
LIMS2-218ENST00000582671 MAP3K21Q5TCX8 1036 aa22.19■■□□□ 1.14
LIMS2-218ENST00000582671 TBC1D10CQ8IV04 446 aa22.19■■□□□ 1.14
LIMS2-218ENST00000582671 NPLOC4Q8TAT6 608 aa22.19■■□□□ 1.14
LIMS2-218ENST00000582671 DEFB118Q96PH6 123 aa22.19■■□□□ 1.14
LIMS2-218ENST00000582671 SLF1Q9BQI6 1058 aa22.19■■□□□ 1.14
LIMS2-218ENST00000582671 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.19■■□□□ 1.14
LIMS2-218ENST00000582671 FLRT1Q9NZU1 646 aa22.19■■□□□ 1.14
LIMS2-218ENST00000582671 ZKSCAN1P17029 563 aaPredicted RBP22.18■■□□□ 1.14
LIMS2-218ENST00000582671 NOVP48745 357 aa22.18■■□□□ 1.14
LIMS2-218ENST00000582671 RRP12Q5JTH9 1297 aaKnown RBP22.18■■□□□ 1.14
LIMS2-218ENST00000582671 SLFN13Q68D06 897 aa22.18■■□□□ 1.14
LIMS2-218ENST00000582671 NCAPG2Q86XI2 1143 aa22.18■■□□□ 1.14
LIMS2-218ENST00000582671 TOMM22Q9NS69 142 aa22.18■■□□□ 1.14
LIMS2-218ENST00000582671 ZNF214Q9UL59 606 aaPredicted RBP22.18■■□□□ 1.14
LIMS2-218ENST00000582671 STX8Q9UNK0 236 aa22.18■■□□□ 1.14
LIMS2-218ENST00000582671 IVNS1ABPQ9Y6Y0 642 aa22.18■■□□□ 1.14
LIMS2-218ENST00000582671 RPTORQ8N122 1335 aa22.17■■□□□ 1.14
LIMS2-218ENST00000582671 CHMP4CQ96CF2 233 aa22.17■■□□□ 1.14
LIMS2-218ENST00000582671 MROH8Q9H579 483 aa22.17■■□□□ 1.14
LIMS2-218ENST00000582671 HMX1Q9NP08 348 aaPredicted RBP22.17■■□□□ 1.14
LIMS2-218ENST00000582671 HOXC6P09630 235 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 PRKAR2AP13861 404 aaKnown RBP22.16■■□□□ 1.14
LIMS2-218ENST00000582671 CACNB2Q08289 660 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-218ENST00000582671 AKNAD1Q5T1N1 836 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 RASGRP2Q7LDG7 609 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 RIOX2Q8IUF8 465 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 TRMT44Q8IYL2 757 aaKnown RBP22.16■■□□□ 1.14
LIMS2-218ENST00000582671 STAG1Q8WVM7 1258 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 DSCC1Q9BVC3 393 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 CRISPLD2Q9H0B8 497 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 SMCHD1A6NHR9 2005 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 ALPK3Q96L96 1907 aa22.16■■□□□ 1.14
LIMS2-218ENST00000582671 STRNO43815 780 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 COBLO75128 1261 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 BMP3P12645 472 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 ADORA2AP29274 412 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 STAT3P40763 770 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 MFSD6Q6ZSS7 791 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 UBE2Q1Q7Z7E8 422 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 PRPF38AQ8NAV1 312 aaKnown RBP22.15■■□□□ 1.14
LIMS2-218ENST00000582671 KIFC2Q96AC6 838 aa22.15■■□□□ 1.14
LIMS2-218ENST00000582671 NEDD4P46934 1319 aa22.14■■□□□ 1.14
LIMS2-218ENST00000582671 ZNF213O14771 459 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 SLC25A27O95847 323 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 IGHA2P01877 340 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 MCCP23508 829 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 CHMLP26374 656 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 CCND3P30281 292 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-218ENST00000582671 SKAP1Q86WV1 359 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 GMCL1Q96IK5 515 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 TCP11L1Q9NUJ3 509 aa22.14■■□□□ 1.13
LIMS2-218ENST00000582671 FEM1BQ9UK73 627 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms