RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 IL17RBQ9NRM6 502 aa12.17□□□□□ -0.46
PPP4R1-220ENST00000581835 FBXO28Q9NVF7 368 aa12.17□□□□□ -0.46
PPP4R1-220ENST00000581835 BIN2Q9UBW5 565 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-220ENST00000581835 ADAMTS5Q9UNA0 930 aa12.17□□□□□ -0.46
PPP4R1-220ENST00000581835 RANBP6O60518 1105 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 INHAP05111 366 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 CYP2B6P20813 491 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 MORN1Q5T089 497 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 CENPQQ7L2Z9 268 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 LRRC47Q8N1G4 583 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 GMCL1P1Q8NEA9 526 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 NUP88Q99567 741 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 SPATC1LQ9H0A9 340 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 PPP1R9AQ9ULJ8 1098 aa12.16□□□□□ -0.46
PPP4R1-220ENST00000581835 ZNF213O14771 459 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 NMT2O60551 498 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 XRCC5P13010 732 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 CCL5P13501 91 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 PTPREP23469 700 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 CHMLP26374 656 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 NOVP48745 357 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 TMEM132BQ14DG7 1078 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 PPP4R3BQ5MIZ7 849 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 UNC93B1Q9H1C4 597 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 CWC22Q9HCG8 908 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 TOMM22Q9NS69 142 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 STX8Q9UNK0 236 aa12.15□□□□□ -0.46
PPP4R1-220ENST00000581835 SLC15A5A6NIM6 579 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 VWA5AO00534 786 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 HMGCRP04035 888 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 GJB1P08034 283 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 ERCC3P19447 782 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 RGS2P41220 211 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 GRB14Q14449 540 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 PLS1Q14651 629 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 TBC1D10CQ8IV04 446 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 PRPF38AQ8NAV1 312 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 SHCBP1Q8NEM2 672 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 REPS2Q8NFH8 660 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 TRIB2Q92519 343 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 SLF1Q9BQI6 1058 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 RNF208Q9H0X6 261 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 RNF41Q9H4P4 317 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 CEP290O15078 2479 aa12.14□□□□□ -0.47
PPP4R1-220ENST00000581835 RAD50Q92878 1312 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 STRNO43815 780 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 BMP3P12645 472 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 GJA8P48165 433 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 TRIM32Q13049 653 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 CCL14Q16627 93 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 RUFY2Q8WXA3 655 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 MROH8Q9H579 483 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 FEM1BQ9UK73 627 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 ZNF214Q9UL59 606 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 IVNS1ABPQ9Y6Y0 642 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 ZNF236Q9UL36 1845 aa12.13□□□□□ -0.47
PPP4R1-220ENST00000581835 NEDD4P46934 1319 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 SMCHD1A6NHR9 2005 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 SLC25A27O95847 323 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 HOXC6P09630 235 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 MCCP23508 829 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 STAT3P40763 770 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 NCAPG2Q86XI2 1143 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 ESR2Q92731 530 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 GMCL1Q96IK5 515 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 APBA2Q99767 749 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 CTNNA3Q9UI47 895 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 PLXNA1Q9UIW2 1896 aa12.12□□□□□ -0.47
PPP4R1-220ENST00000581835 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 TMEM232C9JQI7 657 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 SGSM2O43147 1006 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 SGPL1O95470 568 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 ZKSCAN1P17029 563 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 ADORA2AP29274 412 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 SLC1A4P43007 532 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 NT5C2P49902 561 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 PTH1RQ03431 593 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 RIOX2Q8IUF8 465 aa12.11□□□□□ -0.47
PPP4R1-220ENST00000581835 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms