RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 SYNE3Q6ZMZ3 975 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 CATIPQ7Z7H3 387 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 PRPF38AQ8NAV1 312 aaKnown RBP10.46□□□□□ -0.73
RTTN-208ENST00000581709 PNMA1Q8ND90 353 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 DCAF4Q8WV16 495 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 TSKSQ9UJT2 592 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 CYP46A1Q9Y6A2 500 aa10.46□□□□□ -0.73
RTTN-208ENST00000581709 BAZ2AQ9UIF9 1905 aaKnown RBP10.46□□□□□ -0.74
RTTN-208ENST00000581709 CDK5RAP2Q96SN8 1893 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 CCDC69A6NI79 296 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 TMEM232C9JQI7 657 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 GPR25O00155 361 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 FOXN1O15353 648 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 FKTNO75072 461 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 DSG3P32926 999 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 LIFRP42702 1097 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 ANTXR2P58335 489 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 SP3Q02447 781 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 KIF22Q14807 665 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 SEC23AQ15436 765 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 CCDC96Q2M329 555 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
RTTN-208ENST00000581709 C17orf99Q6UX52 265 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 RUFY3Q7L099 469 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 FAM160B2Q86V87 743 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 GPRC5AQ8NFJ5 357 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 CHMP4CQ96CF2 233 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 NUP88Q99567 741 aaPredicted RBP10.45□□□□□ -0.74
RTTN-208ENST00000581709 TM6SF1Q9BZW5 370 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 R3HDMLQ9H3Y0 253 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 CPA4Q9UI42 421 aa10.45□□□□□ -0.74
RTTN-208ENST00000581709 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
RTTN-208ENST00000581709 SIPA1L1O43166 1804 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 PLA2G6O60733 806 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 ZBED4O75132 1171 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 FDX1P10109 184 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 PDHBP11177 359 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 CASTP20810 708 aaKnown RBP10.44□□□□□ -0.74
RTTN-208ENST00000581709 RPS6KB1P23443 525 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 STAT2P52630 851 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 LBX1P52954 281 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 GPATCH4Q5T3I0 446 aaKnown RBP10.44□□□□□ -0.74
RTTN-208ENST00000581709 LBX2Q6XYB7 198 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 KCTD1Q719H9 257 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 CCAR1Q8IX12 1150 aaKnown RBP10.44□□□□□ -0.74
RTTN-208ENST00000581709 ANKRD13CQ8N6S4 541 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 KIFC2Q96AC6 838 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 SLF1Q9BQI6 1058 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 LY9Q9HBG7 655 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 ZSWIM6Q9HCJ5 1215 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 RBPJLQ9UBG7 517 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 RABGAP1Q9Y3P9 1069 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 SLC12A7Q9Y666 1083 aa10.44□□□□□ -0.74
RTTN-208ENST00000581709 MYPNQ86TC9 1320 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 SH2B2O14492 632 aaPredicted RBP10.43□□□□□ -0.74
RTTN-208ENST00000581709 PARP1P09874 1014 aaKnown RBP10.43□□□□□ -0.74
RTTN-208ENST00000581709 CALM1P0DP23 149 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 CALM2P0DP24 149 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 CALM3P0DP25 149 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 HSPA8P11142 646 aaKnown RBP10.43□□□□□ -0.74
RTTN-208ENST00000581709 CCNA1P78396 465 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 ZNF543Q08ER8 600 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 ZNF296Q8WUU4 475 aaPredicted RBP10.43□□□□□ -0.74
RTTN-208ENST00000581709 ERO1AQ96HE7 468 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 LRRC2Q9BYS8 371 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 C22orf23Q9BZE7 217 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 FBXO28Q9NVF7 368 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 ADAMTS5Q9UNA0 930 aa10.43□□□□□ -0.74
RTTN-208ENST00000581709 FRMPD2Q68DX3 1309 aaPredicted RBP10.42□□□□□ -0.74
RTTN-208ENST00000581709 SPDYE16A6NNV3 312 aaPredicted RBP10.42□□□□□ -0.74
RTTN-208ENST00000581709 VWA5AO00534 786 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 DDAH1O94760 285 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 SNHG28P0DPA3 235 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 BCRP11274 1271 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 CPA1P15085 419 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 KIF5BP33176 963 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 PLS1Q14651 629 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 FAM110CQ1W6H9 321 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 ASPRV1Q53RT3 343 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 Q6ZUG5 572 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 SGMS1Q86VZ5 419 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 FBXL16Q8N461 479 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 CTCFLQ8NI51 663 aaPredicted RBP10.42□□□□□ -0.74
RTTN-208ENST00000581709 NUP133Q8WUM0 1156 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 ATG4CQ96DT6 458 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 MAP3K14Q99558 947 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 PAGR1Q9BTK6 254 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 BACH2Q9BYV9 841 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 SENP2Q9HC62 589 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 PRDM10Q9NQV6 1147 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
RTTN-208ENST00000581709 PDRG1Q9NUG6 133 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 MORF4L1Q9UBU8 362 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 DOCK1Q14185 1865 aa10.42□□□□□ -0.74
RTTN-208ENST00000581709 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms