RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 KCTD2Q14681 263 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 TMEM132BQ14DG7 1078 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 LRRC41Q15345 812 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 ANO1Q5XXA6 986 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 ZSCAN25Q6NSZ9 544 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 RIOX2Q8IUF8 465 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 HAUS7Q99871 368 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 GOPCQ9HD26 462 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 DIS3Q9Y2L1 958 aaKnown RBP12.37□□□□□ -0.43
GGA3-210ENST00000580799 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
GGA3-210ENST00000580799 ZNFX1Q9P2E3 1918 aaKnown RBP12.37□□□□□ -0.43
GGA3-210ENST00000580799 CUL9Q8IWT3 2517 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 VWA5AO00534 786 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
GGA3-210ENST00000580799 RARBP10826 455 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 EEF2P13639 858 aaKnown RBP12.36□□□□□ -0.43
GGA3-210ENST00000580799 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 PRAMEF19Q5SWL8 479 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 ZNF697Q5TEC3 545 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 RNF180Q86T96 592 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 GUCD1Q96NT3 240 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 MMP19Q99542 508 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 TINF2Q9BSI4 451 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 BOLA2Q9H3K6 86 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 XPNPEP3Q9NQH7 507 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 PRDM5Q9NQX1 630 aaPredicted RBP12.36□□□□□ -0.43
GGA3-210ENST00000580799 PHF24Q9UPV7 400 aa12.36□□□□□ -0.43
GGA3-210ENST00000580799 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
GGA3-210ENST00000580799 CYP2D7A0A087X1C5 515 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 STAT3P40763 770 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 SHHQ15465 462 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
GGA3-210ENST00000580799 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 PDLIM7Q9NR12 457 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 ARPP21Q9UBL0 812 aaPredicted RBP12.35□□□□□ -0.43
GGA3-210ENST00000580799 ZNF214Q9UL59 606 aaPredicted RBP12.35□□□□□ -0.43
GGA3-210ENST00000580799 PPP1R9AQ9ULJ8 1098 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
GGA3-210ENST00000580799 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
GGA3-210ENST00000580799 ZNF792Q3KQV3 632 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 SLFNL1Q499Z3 407 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA3-210ENST00000580799 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
GGA3-210ENST00000580799 BADQ92934 168 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 FERMT2Q96AC1 680 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 LRRCC1Q9C099 1032 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 FBXO28Q9NVF7 368 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 CNPY2Q9Y2B0 182 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 COG6Q9Y2V7 657 aa12.34□□□□□ -0.43
GGA3-210ENST00000580799 A0A0C4DFX4 3053 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 SMIM22K7EJ46 135 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 PGK2P07205 417 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 AKR1A1P14550 325 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 TLE2Q04725 743 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 C9orf50Q5SZB4 431 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 FAM83BQ5T0W9 1011 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 GIMAP6Q6P9H5 292 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 MIER1Q8N108 512 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 REPS2Q8NFH8 660 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 FAM161BQ96MY7 647 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 TEX13BQ9BXU2 312 aa12.33□□□□□ -0.44
GGA3-210ENST00000580799 TRIM43BA6NCK2 446 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 KIAA0355O15063 1070 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 RAD21O60216 631 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 CLTBP09497 229 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 ZNF865P0CJ78 1059 aaPredicted RBP12.32□□□□□ -0.44
GGA3-210ENST00000580799 SBK1Q52WX2 424 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 PRPF38AQ8NAV1 312 aaKnown RBP12.32□□□□□ -0.44
GGA3-210ENST00000580799 TRIM43Q96BQ3 446 aaPredicted RBP12.32□□□□□ -0.44
GGA3-210ENST00000580799 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
GGA3-210ENST00000580799 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 TSEN34Q9BSV6 310 aaKnown RBP12.32□□□□□ -0.44
GGA3-210ENST00000580799 PUS7LQ9H0K6 701 aaKnown RBP12.32□□□□□ -0.44
GGA3-210ENST00000580799 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 SYNGAP1Q96PV0 1343 aa12.32□□□□□ -0.44
GGA3-210ENST00000580799 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 A0A1W2PQ45 241 aaPredicted RBP12.31□□□□□ -0.44
GGA3-210ENST00000580799 A0A1W2PQY0 241 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 PGK1P00558 417 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 RAG1P15918 1043 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 RASA1P20936 1047 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 MAMDC4Q6UXC1 1216 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 TOX2Q96NM4 488 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 STRBPQ96SI9 672 aaKnown RBP12.31□□□□□ -0.44
GGA3-210ENST00000580799 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
GGA3-210ENST00000580799 COL25A1Q9BXS0 654 aaPredicted RBP12.31□□□□□ -0.44
GGA3-210ENST00000580799 SEMA6BQ9H3T3 888 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 MKNK2Q9HBH9 465 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 ZNF287Q9HBT7 754 aa12.31□□□□□ -0.44
GGA3-210ENST00000580799 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms