RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 MRE11P49959 708 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 JAG1P78504 1218 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 TMEM39BQ9GZU3 492 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 UBA5Q9GZZ9 404 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
CDK5RAP3-218ENST00000580391 FZD9O00144 591 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 GMPSP49915 693 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 NLRP5P59047 1200 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ABCB5Q2M3G0 1257 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ASPRV1Q53RT3 343 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 HOMER1Q86YM7 354 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 BRMS1Q9HCU9 246 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CABP5Q9NP86 173 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 DDX19AQ9NUU7 478 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 GJA3Q9Y6H8 435 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 MYO1BO43795 1136 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RPS12P25398 132 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ICA1Q05084 483 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 HEATR3Q7Z4Q2 680 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 FHDC1Q9C0D6 1143 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 HERC5Q9UII4 1024 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SCAF8Q9UPN6 1271 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-218ENST00000580391 STXBP3O00186 592 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ZNF543Q08ER8 600 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CAMK4Q16566 473 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 MICALL2Q8IY33 904 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 MRPS27Q92552 414 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RBSNQ9H1K0 784 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CLSTN2Q9H4D0 955 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 KANSL2Q9H9L4 492 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 GPCPD1Q9NPB8 672 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 PCDHB6Q9Y5E3 794 aa17.05■□□□□ 0.32
CDK5RAP3-218ENST00000580391 GH2P01242 217 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CCDC96Q2M329 555 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 PPP4R3BQ5MIZ7 849 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RBM26Q5T8P6 1007 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CCDC73Q6ZRK6 1079 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 FAM83AQ86UY5 434 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 PIGSQ96S52 555 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 VAT1LQ9HCJ6 419 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 BARHL2Q9NY43 387 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 NYAP2Q9P242 653 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 A0A1W2PQ27 194 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 A0A1W2PQ64 194 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 A0A1W2PQD8 194 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 WNT7AO00755 349 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 PPP6R2O75170 966 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RRP36Q96EU6 259 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 TSPY26PQ9H489 355 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RIOX1Q9H6W3 641 aa17.04■□□□□ 0.32
CDK5RAP3-218ENST00000580391 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 LETM1O95202 739 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 FAM160A1Q05DH4 1040 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SNW1Q13573 536 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 TTBK2Q6IQ55 1244 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 MKL1Q969V6 931 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 TNMDQ9H2S6 317 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SRCAPQ6ZRS2 3230 aa17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 ASTN2O75129 1339 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RAD21O60216 631 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CALML3P27482 149 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 KCTD1Q719H9 257 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 BLIDQ8IZY5 108 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 CCDC148Q8NFR7 591 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 RASGRP4Q8TDF6 673 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 FUCA2Q9BTY2 467 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 PGAP2Q9UHJ9 254 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 PCDHA4Q9UN74 947 aa17.02■□□□□ 0.32
CDK5RAP3-218ENST00000580391 NDUFA8P51970 172 aa17.02■□□□□ 0.31
CDK5RAP3-218ENST00000580391 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.31
CDK5RAP3-218ENST00000580391 PIK3AP1Q6ZUJ8 805 aa17.02■□□□□ 0.31
CDK5RAP3-218ENST00000580391 DPF2Q92785 391 aa17.02■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CLIC6Q96NY7 704 aa17.02■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.31
CDK5RAP3-218ENST00000580391 NAPAP54920 295 aa17.01■□□□□ 0.31
CDK5RAP3-218ENST00000580391 ARHGAP27Q6ZUM4 889 aa17.01■□□□□ 0.31
CDK5RAP3-218ENST00000580391 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
CDK5RAP3-218ENST00000580391 CKAP2LQ8IYA6 745 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms