RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 KLHDC9Q8NEP7 349 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 SPATC1LQ9H0A9 340 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 PCDHA11Q9Y5I1 949 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 SIP14410 1827 aa13.75□□□□□ -0.21
GGA3-206ENST00000578773 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 TANC1Q9C0D5 1861 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 FLT1P17948 1338 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
GGA3-206ENST00000578773 GRB10Q13322 594 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 CCDC174Q6PII3 467 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 HFE2Q6ZVN8 426 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 SLF2Q8IX21 1173 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 TGFBRAP1Q8WUH2 860 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 ARNTL2Q8WYA1 636 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 WNT8AQ9H1J5 351 aa13.74□□□□□ -0.21
GGA3-206ENST00000578773 PA2G4Q9UQ80 394 aaKnown RBP13.74□□□□□ -0.21
GGA3-206ENST00000578773 SSTR3P32745 418 aaPredicted RBP13.73□□□□□ -0.21
GGA3-206ENST00000578773 TIMM10P62072 90 aa13.73□□□□□ -0.21
GGA3-206ENST00000578773 CSPP1Q1MSJ5 1256 aa13.73□□□□□ -0.21
GGA3-206ENST00000578773 ADGRA1Q86SQ6 560 aa13.73□□□□□ -0.21
GGA3-206ENST00000578773 NCAPG2Q86XI2 1143 aa13.73□□□□□ -0.21
GGA3-206ENST00000578773 CRACR2BQ8N4Y2 399 aaPredicted RBP13.73□□□□□ -0.21
GGA3-206ENST00000578773 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.73□□□□□ -0.21
GGA3-206ENST00000578773 DMDP11532 3685 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 ZBBXA8MT70 800 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 CD4P01730 458 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 TAP1Q03518 808 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 PLS1Q14651 629 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 SCLYQ96I15 445 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 TSEN34Q9BSV6 310 aaKnown RBP13.72□□□□□ -0.21
GGA3-206ENST00000578773 KIAA1683Q9H0B3 1180 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 AATFQ9NY61 560 aaKnown RBP eCLIP13.72□□□□□ -0.21
GGA3-206ENST00000578773 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 VPS13AQ96RL7 3174 aa13.72□□□□□ -0.21
GGA3-206ENST00000578773 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.21
GGA3-206ENST00000578773 ARVCFO00192 962 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 STRNO43815 780 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 ST18O60284 1047 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 ASGR1P07306 291 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 AKR1A1P14550 325 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 ATP2A2P16615 1042 aaKnown RBP13.71□□□□□ -0.21
GGA3-206ENST00000578773 PTGS1P23219 599 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 GUCY1A2P33402 732 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 IER5LQ5T953 404 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
GGA3-206ENST00000578773 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
GGA3-206ENST00000578773 GDPD5Q8WTR4 605 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 NUP133Q8WUM0 1156 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 USP44Q9H0E7 712 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 FAM86C1Q9NVL1 165 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
GGA3-206ENST00000578773 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.22
GGA3-206ENST00000578773 EVX2Q03828 476 aa13.7□□□□□ -0.22
GGA3-206ENST00000578773 SHCBP1Q8NEM2 672 aa13.7□□□□□ -0.22
GGA3-206ENST00000578773 ATG4CQ96DT6 458 aa13.7□□□□□ -0.22
GGA3-206ENST00000578773 HIPK3Q9H422 1215 aa13.7□□□□□ -0.22
GGA3-206ENST00000578773 UBE2ZQ9H832 354 aaPredicted RBP13.7□□□□□ -0.22
GGA3-206ENST00000578773 RAI14Q9P0K7 980 aa13.7□□□□□ -0.22
GGA3-206ENST00000578773 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
GGA3-206ENST00000578773 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 A0A1W2PRG0 241 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 MOXD2PA6NHM9 499 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 RGS20O76081 388 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 ZNF792Q3KQV3 632 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 TMEM67Q5HYA8 995 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 VTI1AQ96AJ9 217 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 NOC4LQ9BVI4 516 aaKnown RBP13.69□□□□□ -0.22
GGA3-206ENST00000578773 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 KCNH6Q9H252 994 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 MTIF3Q9H2K0 278 aaKnown RBP13.69□□□□□ -0.22
GGA3-206ENST00000578773 DHX36Q9H2U1 1008 aaKnown RBP13.69□□□□□ -0.22
GGA3-206ENST00000578773 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
GGA3-206ENST00000578773 ELP1O95163 1332 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 IL16Q14005 1332 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 WDR87Q6ZQQ6 2873 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 A0A0U1RQG5 324 aaPredicted RBP13.68□□□□□ -0.22
GGA3-206ENST00000578773 ZBTB22O15209 634 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 CTAGE5O15320 804 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 DCXO43602 365 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 C6orf222P0C671 652 aaPredicted RBP13.68□□□□□ -0.22
GGA3-206ENST00000578773 DYNLL1P63167 89 aaKnown RBP13.68□□□□□ -0.22
GGA3-206ENST00000578773 FOXP4Q8IVH2 680 aaPredicted RBP13.68□□□□□ -0.22
GGA3-206ENST00000578773 XAGE2Q96GT9 111 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 GLT1D1Q96MS3 346 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 GINM1Q9NU53 330 aa13.68□□□□□ -0.22
GGA3-206ENST00000578773 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
GGA3-206ENST00000578773 KMT2BQ9UMN6 2715 aaPredicted RBP13.67□□□□□ -0.22
GGA3-206ENST00000578773 LCHNA4D1U4 455 aa13.67□□□□□ -0.22
GGA3-206ENST00000578773 CIAO1O76071 339 aa13.67□□□□□ -0.22
GGA3-206ENST00000578773 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
GGA3-206ENST00000578773 LDHCP07864 332 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms