RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 AAMPQ13685 434 aa18.94■□□□□ 0.62
CRLF3-203ENST00000578692 TMEM132BQ14DG7 1078 aa18.94■□□□□ 0.62
CRLF3-203ENST00000578692 FAM83BQ5T0W9 1011 aa18.94■□□□□ 0.62
CRLF3-203ENST00000578692 C11orf49Q9H6J7 331 aa18.94■□□□□ 0.62
CRLF3-203ENST00000578692 CLIP2Q9UDT6 1046 aa18.94■□□□□ 0.62
CRLF3-203ENST00000578692 STAP2Q9UGK3 403 aa18.94■□□□□ 0.62
CRLF3-203ENST00000578692 A0A0G2JMZ2 1700 aa18.94■□□□□ 0.62
CRLF3-203ENST00000578692 F5H6K3 240 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 PRDM1O75626 825 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 SLC25A27O95847 323 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 CYP2C19P33261 490 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 KLRC3Q07444 240 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 EVI5LQ96CN4 794 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 NAPBQ9H115 298 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 SLC5A4Q9NY91 659 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 PPP1R9AQ9ULJ8 1098 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 GREB1LQ9C091 1923 aaPredicted RBP18.93■□□□□ 0.62
CRLF3-203ENST00000578692 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 IGKV6D-41A0A0C4DH26 115 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 VWA5AO00534 786 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 COBLO75128 1261 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 CNGA1P29973 690 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 PDE1AP54750 535 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 PDE4BQ07343 736 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 OLFML2BQ68BL8 750 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 ABRAQ8N0Z2 381 aa18.93■□□□□ 0.62
CRLF3-203ENST00000578692 IGHA2P01877 340 aa18.92■□□□□ 0.62
CRLF3-203ENST00000578692 SLC3A2P08195 630 aaKnown RBP18.92■□□□□ 0.62
CRLF3-203ENST00000578692 FCER1AP12319 257 aa18.92■□□□□ 0.62
CRLF3-203ENST00000578692 STAT3P40763 770 aa18.92■□□□□ 0.62
CRLF3-203ENST00000578692 FXR1P51114 621 aaKnown RBP eCLIP18.92■□□□□ 0.62
CRLF3-203ENST00000578692 RIOX2Q8IUF8 465 aa18.92■□□□□ 0.62
CRLF3-203ENST00000578692 MKL1Q969V6 931 aa18.92■□□□□ 0.62
CRLF3-203ENST00000578692 MTMR4Q9NYA4 1195 aa18.92■□□□□ 0.62
CRLF3-203ENST00000578692 RBM27Q9P2N5 1060 aaKnown RBP18.92■□□□□ 0.62
CRLF3-203ENST00000578692 MSCO60682 206 aa18.91■□□□□ 0.62
CRLF3-203ENST00000578692 PPARAQ07869 468 aa18.91■□□□□ 0.62
CRLF3-203ENST00000578692 CCDC129Q6ZRS4 1044 aa18.91■□□□□ 0.62
CRLF3-203ENST00000578692 CEP95Q96GE4 821 aa18.91■□□□□ 0.62
CRLF3-203ENST00000578692 NUP88Q99567 741 aaPredicted RBP18.91■□□□□ 0.62
CRLF3-203ENST00000578692 RWDD1Q9H446 243 aaPredicted RBP18.91■□□□□ 0.62
CRLF3-203ENST00000578692 DDX20Q9UHI6 824 aaKnown RBP18.91■□□□□ 0.62
CRLF3-203ENST00000578692 COL11A1P12107 1806 aaPredicted RBP18.9■□□□□ 0.62
CRLF3-203ENST00000578692 ALPK3Q96L96 1907 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 TTLL1O95922 423 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 NDUFB10O96000 172 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 TSPY3P0CV98 308 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 TSPY8P0CW00 308 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 C7orf61Q8IZ16 206 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 PRPF38AQ8NAV1 312 aaKnown RBP18.9■□□□□ 0.62
CRLF3-203ENST00000578692 TRPV1Q8NER1 839 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 NEDD1Q8NHV4 660 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 SLF1Q9BQI6 1058 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 PCDH10Q9P2E7 1040 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 ZNF214Q9UL59 606 aaPredicted RBP18.9■□□□□ 0.62
CRLF3-203ENST00000578692 ZNF236Q9UL36 1845 aa18.9■□□□□ 0.62
CRLF3-203ENST00000578692 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
CRLF3-203ENST00000578692 PFASO15067 1338 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 COL6A1P12109 1028 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 CYBAP13498 195 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 TFAP4Q01664 338 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 REPS2Q8NFH8 660 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 MAML3Q96JK9 1138 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 MMP19Q99542 508 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 LNPKQ9C0E8 428 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 PRO3102Q9H379 93 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 HELLSQ9NRZ9 838 aa18.89■□□□□ 0.61
CRLF3-203ENST00000578692 MYH4Q9Y623 1939 aa18.88■□□□□ 0.61
CRLF3-203ENST00000578692 FOXP2O15409 715 aa18.88■□□□□ 0.61
CRLF3-203ENST00000578692 COPB2P35606 906 aa18.88■□□□□ 0.61
CRLF3-203ENST00000578692 SYNPO2Q9UMS6 1093 aa18.88■□□□□ 0.61
CRLF3-203ENST00000578692 CTDSPL2Q05D32 466 aa18.87■□□□□ 0.61
CRLF3-203ENST00000578692 KCTD2Q14681 263 aa18.87■□□□□ 0.61
CRLF3-203ENST00000578692 PRAMEF19Q5SWL8 479 aa18.87■□□□□ 0.61
CRLF3-203ENST00000578692 VPS53Q5VIR6 699 aa18.87■□□□□ 0.61
CRLF3-203ENST00000578692 B4GALNT3Q6L9W6 998 aa18.87■□□□□ 0.61
CRLF3-203ENST00000578692 TICAM2Q86XR7 235 aa18.87■□□□□ 0.61
CRLF3-203ENST00000578692 SMC5Q8IY18 1101 aa18.87■□□□□ 0.61
CRLF3-203ENST00000578692 ZBED4O75132 1171 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 PGK2P07205 417 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 MCMDC2Q4G0Z9 681 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 LRRC47Q8N1G4 583 aaKnown RBP18.86■□□□□ 0.61
CRLF3-203ENST00000578692 GMCL1P1Q8NEA9 526 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 TEX13BQ9BXU2 312 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 SENP6Q9GZR1 1112 aaPredicted RBP18.86■□□□□ 0.61
CRLF3-203ENST00000578692 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 FEM1BQ9UK73 627 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 ZMYND8Q9ULU4 1186 aaPredicted RBP18.86■□□□□ 0.61
CRLF3-203ENST00000578692 DIS3Q9Y2L1 958 aaKnown RBP18.86■□□□□ 0.61
CRLF3-203ENST00000578692 CTDP1Q9Y5B0 961 aaPredicted RBP18.86■□□□□ 0.61
CRLF3-203ENST00000578692 PLIN4Q96Q06 1357 aa18.86■□□□□ 0.61
CRLF3-203ENST00000578692 FRMPD3Q5JV73 1810 aa18.85■□□□□ 0.61
CRLF3-203ENST00000578692 TRIM6-TRIM34B2RNG4 842 aa18.85■□□□□ 0.61
CRLF3-203ENST00000578692 SEPT4O43236 478 aa18.85■□□□□ 0.61
CRLF3-203ENST00000578692 IGHDP01880 384 aa18.85■□□□□ 0.61
CRLF3-203ENST00000578692 SLFN13Q68D06 897 aa18.85■□□□□ 0.61
CRLF3-203ENST00000578692 EXOC6Q8TAG9 804 aa18.85■□□□□ 0.61
CRLF3-203ENST00000578692 KIFC2Q96AC6 838 aa18.85■□□□□ 0.61
CRLF3-203ENST00000578692 FAM227BQ96M60 508 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms