RNA–Protein interactions for RNA: ENST00000578619.1

GAREM1-203, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

TSL 4

Gene GAREM1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-203ENST00000578619 PTPN13Q12923 2485 aa5.59□□□□□ -1.51
GAREM1-203ENST00000578619 TRIOO75962 3097 aa5.59□□□□□ -1.51
GAREM1-203ENST00000578619 LRRC37AA6NMS7 1700 aa5.59□□□□□ -1.51
GAREM1-203ENST00000578619 ANKRD17O75179 2603 aaKnown RBP5.58□□□□□ -1.52
GAREM1-203ENST00000578619 A0A1W2PRU2 124 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 CDC14CA4D256 554 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 USP17L3A6NCW0 530 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 USP17L4A6NCW7 530 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 EPOPA6NHQ4 379 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 NTSR2O95665 410 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 MYOGP15173 224 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 RAG1P15918 1043 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 AVPR2P30518 371 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 RABGGTBP53611 331 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 ZP2Q05996 745 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 LEXMQ3ZCV2 418 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 DDX46Q7L014 1031 aaKnown RBP5.58□□□□□ -1.52
GAREM1-203ENST00000578619 USP17L1Q7RTZ2 530 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 PRICKLE2Q7Z3G6 844 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 TMC4Q7Z404 712 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 CYP2U1Q7Z449 544 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 ANKRD23Q86SG2 305 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 AEBP1Q8IUX7 1158 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 VWA5B2Q8N398 1253 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 CRACR2BQ8N4Y2 399 aaPredicted RBP5.58□□□□□ -1.52
GAREM1-203ENST00000578619 TBC1D16Q8TBP0 767 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 TEX13AQ9BXU3 409 aaPredicted RBP5.58□□□□□ -1.52
GAREM1-203ENST00000578619 VEZTQ9HBM0 779 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 COL4A1P02462 1669 aa5.58□□□□□ -1.52
GAREM1-203ENST00000578619 HELZ2Q9BYK8 2649 aaKnown RBP5.58□□□□□ -1.52
GAREM1-203ENST00000578619 ZNF536O15090 1300 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 RNMTO43148 476 aaKnown RBP5.57□□□□□ -1.52
GAREM1-203ENST00000578619 TRAK2O60296 914 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 SCTRP47872 440 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 HERC4Q5GLZ8 1057 aaPredicted RBP5.57□□□□□ -1.52
GAREM1-203ENST00000578619 MAP3K21Q5TCX8 1036 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 KIAA0319Q5VV43 1072 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 SLC39A5Q6ZMH5 540 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 KCNG4Q8TDN1 519 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 EDAQ92838 391 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 PRM3Q9NNZ6 103 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 DAGLAQ9Y4D2 1042 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 PCDHB11Q9Y5F2 797 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 PCDHAC2Q9Y5I4 1007 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 PPP2R3BQ9Y5P8 575 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 SNCAIPQ9Y6H5 919 aa5.57□□□□□ -1.52
GAREM1-203ENST00000578619 IBTKQ9P2D0 1353 aaPredicted RBP5.56□□□□□ -1.52
GAREM1-203ENST00000578619 ZNF804BA4D1E1 1349 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 MEN1O00255 615 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 UFL1O94874 794 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 POU3F3P20264 500 aaPredicted RBP5.56□□□□□ -1.52
GAREM1-203ENST00000578619 CLN3Q13286 438 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 RASA3Q14644 834 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 EPHA10Q5JZY3 1008 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 RNFT1Q5M7Z0 435 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 MCTP2Q6DN12 878 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 LRSAM1Q6UWE0 723 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 KIAA0825Q8IV33 1275 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.56□□□□□ -1.52
GAREM1-203ENST00000578619 HINFPQ9BQA5 517 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 OSBPL3Q9H4L5 887 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 CEP126Q9P2H0 1117 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 USP16Q9Y5T5 823 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 GBF1Q92538 1859 aa5.56□□□□□ -1.52
GAREM1-203ENST00000578619 PSME4Q14997 1843 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 WDR87Q6ZQQ6 2873 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 DCDC2BA2VCK2 349 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 ACRP10323 421 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 HCLS1P14317 486 aaPredicted RBP5.55□□□□□ -1.52
GAREM1-203ENST00000578619 RHOQP17081 205 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 CYP2B6P20813 491 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 TLE2Q04725 743 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 CACNB2Q08289 660 aaPredicted RBP5.55□□□□□ -1.52
GAREM1-203ENST00000578619 PPIL2Q13356 520 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 TMEM240Q5SV17 173 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 DACT2Q5SW24 774 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 GJC2Q5T442 439 aaPredicted RBP5.55□□□□□ -1.52
GAREM1-203ENST00000578619 RASIP1Q5U651 963 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 C16orf59Q7L2K0 433 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 ERO1BQ86YB8 467 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 RNF135Q8IUD6 432 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 NGEFQ8N5V2 710 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 GMCL1Q96IK5 515 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 ZBED3Q96IU2 234 aaPredicted RBP5.55□□□□□ -1.52
GAREM1-203ENST00000578619 UPF3BQ9BZI7 483 aaKnown RBP5.55□□□□□ -1.52
GAREM1-203ENST00000578619 CUEDC1Q9NWM3 386 aaPredicted RBP5.55□□□□□ -1.52
GAREM1-203ENST00000578619 DOCK3Q8IZD9 2030 aa5.55□□□□□ -1.52
GAREM1-203ENST00000578619 SPATA31C2B4DYI2 1134 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 H3BQ06 376 aaPredicted RBP5.54□□□□□ -1.52
GAREM1-203ENST00000578619 DNM1LO00429 736 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 CLTBP09497 229 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 SLURP2P0DP57 97 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 ATXN1P54253 815 aaKnown RBP5.54□□□□□ -1.52
GAREM1-203ENST00000578619 EIF4G2P78344 907 aaKnown RBP eCLIP5.54□□□□□ -1.52
GAREM1-203ENST00000578619 RING1Q06587 406 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 MOGSQ13724 837 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 DLGAP5Q15398 846 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 WDR44Q5JSH3 913 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 ZNF790Q6PG37 636 aa5.54□□□□□ -1.52
GAREM1-203ENST00000578619 PPARGC1BQ86YN6 1023 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms