RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 PAGR1Q9BTK6 254 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 CLIP2Q9UDT6 1046 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 GJD2Q9UKL4 321 aa16.18■□□□□ 0.18
CSNK1D-208ENST00000578501 PEX10O60683 326 aa16.17■□□□□ 0.18
CSNK1D-208ENST00000578501 DSG3P32926 999 aa16.17■□□□□ 0.18
CSNK1D-208ENST00000578501 FAM47AQ5JRC9 791 aa16.17■□□□□ 0.18
CSNK1D-208ENST00000578501 DSCC1Q9BVC3 393 aa16.17■□□□□ 0.18
CSNK1D-208ENST00000578501 BTBD7Q9P203 1132 aa16.17■□□□□ 0.18
CSNK1D-208ENST00000578501 ADAMTS5Q9UNA0 930 aa16.17■□□□□ 0.18
CSNK1D-208ENST00000578501 TSPY2A6NKD2 308 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 F5H6K3 240 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 SOX1O00570 391 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 FLOT1O75955 427 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 NOVP48745 357 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 NT5C2P49902 561 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 KLRC3Q07444 240 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 CCAR1Q8IX12 1150 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 GMCL1P1Q8NEA9 526 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 SOCS4Q8WXH5 440 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 LRCH3Q96II8 777 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 PORCNQ9H237 461 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 TACC3Q9Y6A5 838 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 RAD50Q92878 1312 aa16.16■□□□□ 0.18
CSNK1D-208ENST00000578501 ADCY3O60266 1144 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 NDUFB10O96000 172 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 XRCC5P13010 732 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 STAG1Q8WVM7 1258 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 IL17RBQ9NRM6 502 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 CTNNA3Q9UI47 895 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 RLFQ13129 1914 aa16.15■□□□□ 0.18
CSNK1D-208ENST00000578501 ZNF213O14771 459 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 CHMLP26374 656 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 BMP8BP34820 402 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 MORN1Q5T089 497 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 FAM83BQ5T0W9 1011 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 GPR142Q7Z601 462 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 PLEKHH3Q7Z736 793 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 USP6NLQ92738 828 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 NBPF3Q9H094 633 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 SPATC1LQ9H0A9 340 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 UNC93B1Q9H1C4 597 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 TCP11L1Q9NUJ3 509 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
CSNK1D-208ENST00000578501 RAD21O60216 631 aa16.13■□□□□ 0.17
CSNK1D-208ENST00000578501 HAND2P61296 217 aa16.13■□□□□ 0.17
CSNK1D-208ENST00000578501 SHCBP1Q8NEM2 672 aa16.13■□□□□ 0.17
CSNK1D-208ENST00000578501 ATG4CQ96DT6 458 aa16.13■□□□□ 0.17
CSNK1D-208ENST00000578501 IL25Q9H293 177 aa16.13■□□□□ 0.17
CSNK1D-208ENST00000578501 STXBP5LQ9Y2K9 1186 aa16.13■□□□□ 0.17
CSNK1D-208ENST00000578501 A0A0G2JMZ2 1700 aa16.13■□□□□ 0.17
CSNK1D-208ENST00000578501 SLC15A5A6NIM6 579 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 VWA5AO00534 786 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 IMMTQ16891 758 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 SLFN13Q68D06 897 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 TBC1D10CQ8IV04 446 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 TRMT44Q8IYL2 757 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 LRRC47Q8N1G4 583 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 DEFB123Q8N688 67 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 SLF1Q9BQI6 1058 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 MOV10L1Q9BXT6 1211 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 FBXO28Q9NVF7 368 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 DOCK3Q8IZD9 2030 aa16.12■□□□□ 0.17
CSNK1D-208ENST00000578501 RANBP2P49792 3224 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 STRNO43815 780 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 ELNP15502 786 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 PTPREP23469 700 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 RGS2P41220 211 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 GRB14Q14449 540 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 TMEM132BQ14DG7 1078 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 CCDC136Q96JN2 1154 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 TTC14Q96N46 770 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 NUP88Q99567 741 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 MROH8Q9H579 483 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 TOMM22Q9NS69 142 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 FEM1BQ9UK73 627 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
CSNK1D-208ENST00000578501 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 PARP14Q460N5 1801 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 MYH4Q9Y623 1939 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 SGSM2O43147 1006 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 NMT2O60551 498 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 SLC25A27O95847 323 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 HMGCRP04035 888 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 INHAP05111 366 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 NEFLP07196 543 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 HOXC6P09630 235 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 MAP2K5Q13163 448 aa16.1■□□□□ 0.17
CSNK1D-208ENST00000578501 NECAB2Q7Z6G3 386 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms