RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 SHHQ15465 462 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 C16orf86Q6ZW13 317 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 PRDM5Q9NQX1 630 aaPredicted RBP25.3■■□□□ 1.64
TSEN54-205ENST00000578415 PDLIM7Q9NR12 457 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 ZBTB40Q9NUA8 1239 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 FBXO28Q9NVF7 368 aa25.3■■□□□ 1.64
TSEN54-205ENST00000578415 RAB11FIP3O75154 756 aa25.29■■□□□ 1.64
TSEN54-205ENST00000578415 EEF2P13639 858 aaKnown RBP25.29■■□□□ 1.64
TSEN54-205ENST00000578415 C9orf50Q5SZB4 431 aa25.29■■□□□ 1.64
TSEN54-205ENST00000578415 FERMT2Q96AC1 680 aa25.29■■□□□ 1.64
TSEN54-205ENST00000578415 HAUS7Q99871 368 aa25.29■■□□□ 1.64
TSEN54-205ENST00000578415 UNC80Q8N2C7 3258 aa25.29■■□□□ 1.64
TSEN54-205ENST00000578415 SLC25A27O95847 323 aa25.28■■□□□ 1.64
TSEN54-205ENST00000578415 C1orf53Q5VUE5 145 aa25.28■■□□□ 1.64
TSEN54-205ENST00000578415 SH3RF1Q7Z6J0 888 aa25.28■■□□□ 1.64
TSEN54-205ENST00000578415 BADQ92934 168 aa25.28■■□□□ 1.64
TSEN54-205ENST00000578415 ZBED9Q6R2W3 1325 aa25.28■■□□□ 1.64
TSEN54-205ENST00000578415 TRIM43BA6NCK2 446 aa25.27■■□□□ 1.64
TSEN54-205ENST00000578415 PGK2P07205 417 aa25.27■■□□□ 1.64
TSEN54-205ENST00000578415 RIOX2Q8IUF8 465 aa25.27■■□□□ 1.64
TSEN54-205ENST00000578415 TRIM43Q96BQ3 446 aaPredicted RBP25.27■■□□□ 1.64
TSEN54-205ENST00000578415 MMP19Q99542 508 aa25.27■■□□□ 1.64
TSEN54-205ENST00000578415 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.27■■□□□ 1.64
TSEN54-205ENST00000578415 NRBP1Q9UHY1 535 aa25.27■■□□□ 1.64
TSEN54-205ENST00000578415 COG6Q9Y2V7 657 aa25.27■■□□□ 1.64
TSEN54-205ENST00000578415 PARP14Q460N5 1801 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 MS4A1P11836 297 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 UBE3CQ15386 1083 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 ZNF697Q5TEC3 545 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 MIER1Q8N108 512 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 KANSL2Q9H9L4 492 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 XPNPEP3Q9NQH7 507 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 DDX19BQ9UMR2 479 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 PHF24Q9UPV7 400 aa25.26■■□□□ 1.63
TSEN54-205ENST00000578415 BAZ2AQ9UIF9 1905 aaKnown RBP25.25■■□□□ 1.63
TSEN54-205ENST00000578415 VWA5AO00534 786 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 TAL1P17542 331 aaPredicted RBP25.25■■□□□ 1.63
TSEN54-205ENST00000578415 ZNF792Q3KQV3 632 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 CTR9Q6PD62 1173 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.25■■□□□ 1.63
TSEN54-205ENST00000578415 AMOTL1Q8IY63 956 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 REPS2Q8NFH8 660 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 TINF2Q9BSI4 451 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.25■■□□□ 1.63
TSEN54-205ENST00000578415 COL25A1Q9BXS0 654 aaPredicted RBP25.25■■□□□ 1.63
TSEN54-205ENST00000578415 ZNF214Q9UL59 606 aaPredicted RBP25.25■■□□□ 1.63
TSEN54-205ENST00000578415 PPP1R9AQ9ULJ8 1098 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 SLC4A4Q9Y6R1 1079 aa25.25■■□□□ 1.63
TSEN54-205ENST00000578415 RARBP10826 455 aa25.24■■□□□ 1.63
TSEN54-205ENST00000578415 STAT3P40763 770 aa25.24■■□□□ 1.63
TSEN54-205ENST00000578415 TLE2Q04725 743 aa25.24■■□□□ 1.63
TSEN54-205ENST00000578415 PUS7LQ9H0K6 701 aaKnown RBP25.24■■□□□ 1.63
TSEN54-205ENST00000578415 MYH8P13535 1937 aa25.24■■□□□ 1.63
TSEN54-205ENST00000578415 ROBO3Q96MS0 1386 aa25.23■■□□□ 1.63
TSEN54-205ENST00000578415 PGK1P00558 417 aa25.23■■□□□ 1.63
TSEN54-205ENST00000578415 ITGB8P26012 769 aa25.23■■□□□ 1.63
TSEN54-205ENST00000578415 KCTD2Q14681 263 aa25.23■■□□□ 1.63
TSEN54-205ENST00000578415 FAM83BQ5T0W9 1011 aa25.23■■□□□ 1.63
TSEN54-205ENST00000578415 DDRGK1Q96HY6 314 aa25.23■■□□□ 1.63
TSEN54-205ENST00000578415 GOPCQ9HD26 462 aa25.23■■□□□ 1.63
TSEN54-205ENST00000578415 DIS3Q9Y2L1 958 aaKnown RBP25.23■■□□□ 1.63
TSEN54-205ENST00000578415 ZNF865P0CJ78 1059 aaPredicted RBP25.22■■□□□ 1.63
TSEN54-205ENST00000578415 CDX2Q99626 313 aaPredicted RBP25.22■■□□□ 1.63
TSEN54-205ENST00000578415 RNF180Q86T96 592 aa25.21■■□□□ 1.63
TSEN54-205ENST00000578415 LENG1Q96BZ8 264 aaPredicted RBP25.21■■□□□ 1.63
TSEN54-205ENST00000578415 SEMA6BQ9H3T3 888 aa25.21■■□□□ 1.63
TSEN54-205ENST00000578415 COL11A1P12107 1806 aaPredicted RBP25.21■■□□□ 1.63
TSEN54-205ENST00000578415 RAD21O60216 631 aa25.2■■□□□ 1.62
TSEN54-205ENST00000578415 COPB2P35606 906 aa25.2■■□□□ 1.62
TSEN54-205ENST00000578415 SMAD3P84022 425 aaKnown RBP25.2■■□□□ 1.62
TSEN54-205ENST00000578415 TACC3Q9Y6A5 838 aa25.2■■□□□ 1.62
TSEN54-205ENST00000578415 A0A1W2PQ45 241 aaPredicted RBP25.19■■□□□ 1.62
TSEN54-205ENST00000578415 A0A1W2PQY0 241 aa25.19■■□□□ 1.62
TSEN54-205ENST00000578415 CLTBP09497 229 aa25.19■■□□□ 1.62
TSEN54-205ENST00000578415 EPHB4P54760 987 aa25.19■■□□□ 1.62
TSEN54-205ENST00000578415 NUP88Q99567 741 aaPredicted RBP25.19■■□□□ 1.62
TSEN54-205ENST00000578415 TTYH1Q9H313 450 aaPredicted RBP25.19■■□□□ 1.62
TSEN54-205ENST00000578415 ARPP21Q9UBL0 812 aaPredicted RBP25.19■■□□□ 1.62
TSEN54-205ENST00000578415 ADAMTS4O75173 837 aa25.18■■□□□ 1.62
TSEN54-205ENST00000578415 AKR1A1P14550 325 aa25.18■■□□□ 1.62
TSEN54-205ENST00000578415 ZSCAN25Q6NSZ9 544 aa25.18■■□□□ 1.62
TSEN54-205ENST00000578415 STRBPQ96SI9 672 aaKnown RBP25.18■■□□□ 1.62
TSEN54-205ENST00000578415 SMCHD1A6NHR9 2005 aa25.18■■□□□ 1.62
TSEN54-205ENST00000578415 ZNFX1Q9P2E3 1918 aaKnown RBP25.18■■□□□ 1.62
TSEN54-205ENST00000578415 KIAA0355O15063 1070 aa25.17■■□□□ 1.62
TSEN54-205ENST00000578415 RASA1P20936 1047 aa25.17■■□□□ 1.62
TSEN54-205ENST00000578415 SLF1Q9BQI6 1058 aa25.17■■□□□ 1.62
TSEN54-205ENST00000578415 TEX13BQ9BXU2 312 aa25.17■■□□□ 1.62
TSEN54-205ENST00000578415 CNPY2Q9Y2B0 182 aa25.17■■□□□ 1.62
TSEN54-205ENST00000578415 GREB1LQ9C091 1923 aaPredicted RBP25.17■■□□□ 1.62
TSEN54-205ENST00000578415 SMARCA5O60264 1052 aaPredicted RBP25.16■■□□□ 1.62
TSEN54-205ENST00000578415 PQBP1O60828 265 aaKnown RBP25.16■■□□□ 1.62
TSEN54-205ENST00000578415 SBK1Q52WX2 424 aa25.16■■□□□ 1.62
TSEN54-205ENST00000578415 LRRCC1Q9C099 1032 aa25.16■■□□□ 1.62
TSEN54-205ENST00000578415 NYAP2Q9P242 653 aa25.16■■□□□ 1.62
TSEN54-205ENST00000578415 RIPK3Q9Y572 518 aa25.16■■□□□ 1.62
TSEN54-205ENST00000578415 EYSQ5T1H1 3165 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 GSG1L2A8MUP6 293 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 F5H6K3 240 aa25.15■■□□□ 1.62
TSEN54-205ENST00000578415 SNAI1O95863 264 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms