RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SLC35G1Q2M3R5 365 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 USP50Q70EL3 339 aaPredicted RBP21.42■■□□□ 1.02
PRKCA-203ENST00000578063 FAM177A1Q8N128 213 aaPredicted RBP21.42■■□□□ 1.02
PRKCA-203ENST00000578063 GMCL1Q96IK5 515 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 ZNF341Q9BYN7 854 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 RIOX1Q9H6W3 641 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 SH2D4AQ9H788 454 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 VPS54Q9P1Q0 977 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 CFAP45Q9UL16 551 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 MYH6P13533 1939 aa21.42■■□□□ 1.02
PRKCA-203ENST00000578063 U2AF2P26368 475 aaKnown RBP eCLIP21.41■■□□□ 1.025e-8■■□□□ 12.8
PRKCA-203ENST00000578063 SLC1A4P43007 532 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 RRP36Q96EU6 259 aaKnown RBP21.41■■□□□ 1.02
PRKCA-203ENST00000578063 SH3GLB2Q9NR46 395 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 KIF28PB7ZC32 967 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 F5H6K3 240 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 TRAK2O60296 914 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 CTNND1O60716 968 aaKnown RBP21.41■■□□□ 1.02
PRKCA-203ENST00000578063 KLRC3Q07444 240 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 DIS3L2Q8IYB7 885 aaKnown RBP21.41■■□□□ 1.02
PRKCA-203ENST00000578063 DCPSQ96C86 337 aaKnown RBP21.41■■□□□ 1.02
PRKCA-203ENST00000578063 PHF20Q9BVI0 1012 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 FOXP1Q9H334 677 aaPredicted RBP21.41■■□□□ 1.02
PRKCA-203ENST00000578063 GDPD2Q9HCC8 539 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 BRMS1Q9HCU9 246 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 SEC63Q9UGP8 760 aaKnown RBP21.41■■□□□ 1.02
PRKCA-203ENST00000578063 KCNJ14Q9UNX9 436 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 TMX2Q9Y320 296 aa21.41■■□□□ 1.02
PRKCA-203ENST00000578063 SUPT20HL1Q3ZLR7 823 aa21.4■■□□□ 1.02
PRKCA-203ENST00000578063 USP48Q86UV5 1035 aa21.4■■□□□ 1.02
PRKCA-203ENST00000578063 PIBF1Q8WXW3 757 aa21.4■■□□□ 1.02
PRKCA-203ENST00000578063 GOPCQ9HD26 462 aa21.4■■□□□ 1.02
PRKCA-203ENST00000578063 GPCPD1Q9NPB8 672 aa21.4■■□□□ 1.02
PRKCA-203ENST00000578063 ELP1O95163 1332 aa21.39■■□□□ 1.02
PRKCA-203ENST00000578063 A0A1W2PRG0 241 aa21.39■■□□□ 1.01
PRKCA-203ENST00000578063 IQCA1LA6NCM1 817 aa21.39■■□□□ 1.01
PRKCA-203ENST00000578063 NDUFB10O96000 172 aa21.39■■□□□ 1.01
PRKCA-203ENST00000578063 EPHX2P34913 555 aa21.39■■□□□ 1.01
PRKCA-203ENST00000578063 MYSM1Q5VVJ2 828 aa21.39■■□□□ 1.01
PRKCA-203ENST00000578063 SULF1Q8IWU6 871 aa21.39■■□□□ 1.01
PRKCA-203ENST00000578063 CCDC148Q8NFR7 591 aa21.39■■□□□ 1.01
PRKCA-203ENST00000578063 hCG_1984214I3L0E3 225 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 RAD21O60216 631 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 KRT2P35908 639 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 NOSTRINQ8IVI9 506 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 ZNF713Q8N859 430 aaPredicted RBP21.38■■□□□ 1.01
PRKCA-203ENST00000578063 ZC3H15Q8WU90 426 aaKnown RBP21.38■■□□□ 1.01
PRKCA-203ENST00000578063 SHISA4Q96DD7 197 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 UBA5Q9GZZ9 404 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 CPVLQ9H3G5 476 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 ZNF112Q9UJU3 913 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 CALML3P27482 149 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 KCTD1Q719H9 257 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 CCDC12Q8WUD4 166 aaPredicted RBP21.38■■□□□ 1.01
PRKCA-203ENST00000578063 BARHL2Q9NY43 387 aa21.38■■□□□ 1.01
PRKCA-203ENST00000578063 MYH15Q9Y2K3 1946 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 BTBD18B2RXH4 712 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 MBD3O95983 291 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 ECE1P42892 770 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 WWC2Q6AWC2 1192 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 HEATR3Q7Z4Q2 680 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 ACER1Q8TDN7 264 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 SPATA32Q96LK8 384 aa21.37■■□□□ 1.01
PRKCA-203ENST00000578063 TFIP11Q9UBB9 837 aaKnown RBP21.37■■□□□ 1.01
PRKCA-203ENST00000578063 ISY1Q9ULR0 285 aaKnown RBP21.37■■□□□ 1.01
PRKCA-203ENST00000578063 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
PRKCA-203ENST00000578063 SSC5DA1L4H1 1573 aa21.36■■□□□ 1.01
PRKCA-203ENST00000578063 NLRP5P59047 1200 aa21.36■■□□□ 1.01
PRKCA-203ENST00000578063 KLHL40Q2TBA0 621 aa21.36■■□□□ 1.01
PRKCA-203ENST00000578063 GALNT17Q6IS24 598 aa21.36■■□□□ 1.01
PRKCA-203ENST00000578063 HOMER1Q86YM7 354 aa21.36■■□□□ 1.01
PRKCA-203ENST00000578063 LEO1Q8WVC0 666 aaPredicted RBP21.36■■□□□ 1.01
PRKCA-203ENST00000578063 GPKOWQ92917 476 aaPredicted RBP eCLIP21.36■■□□□ 1.01
PRKCA-203ENST00000578063 PIGSQ96S52 555 aa21.36■■□□□ 1.01
PRKCA-203ENST00000578063 SCN4AP35499 1836 aa21.36■■□□□ 1.01
PRKCA-203ENST00000578063 STXBP3O00186 592 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 BMP3P12645 472 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 PRAMEF18Q5VWM3 479 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 TTBK2Q6IQ55 1244 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 SCYL3Q8IZE3 742 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 ADGRF4Q8IZF3 695 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 USP28Q96RU2 1077 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 WRNIP1Q96S55 665 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 VCPKMTQ9H867 229 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 JMJD4Q9H9V9 463 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 VAT1LQ9HCJ6 419 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 ATAD5Q96QE3 1844 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 VEGFAP15692 232 aaPredicted RBP21.35■■□□□ 1.01
PRKCA-203ENST00000578063 UBE2HP62256 183 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 MTMR8Q96EF0 704 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 POLR3EQ9NVU0 708 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 RTEL1Q9NZ71 1219 aa21.35■■□□□ 1.01
PRKCA-203ENST00000578063 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.35■■□□□ 1.01
PRKCA-203ENST00000578063 WDR90Q96KV7 1748 aa21.34■■□□□ 1.01
PRKCA-203ENST00000578063 TCHHQ07283 1943 aa21.34■■□□□ 1.01
PRKCA-203ENST00000578063 DCAF8L1A6NGE4 600 aa21.34■■□□□ 1.01
PRKCA-203ENST00000578063 INPP5BP32019 993 aa21.34■■□□□ 1.01
PRKCA-203ENST00000578063 NPY5RQ15761 445 aa21.34■■□□□ 1.01
PRKCA-203ENST00000578063 KRT26Q7Z3Y9 468 aa21.34■■□□□ 1.01
PRKCA-203ENST00000578063 FEZ1Q99689 392 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms