RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PLXNB2O15031 1838 aa22.82■■□□□ 1.24
SS18-208ENST00000577751 CYP21A2P08686 494 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 SLFN13Q68D06 897 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 MB21D1Q8N884 522 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 ARMC5Q96C12 935 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 ATG4CQ96DT6 458 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 TTC14Q96N46 770 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 PORCNQ9H237 461 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 GJD2Q9UKL4 321 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 PPP1R9AQ9ULJ8 1098 aa22.81■■□□□ 1.24
SS18-208ENST00000577751 COL11A1P12107 1806 aaPredicted RBP22.8■■□□□ 1.24
SS18-208ENST00000577751 MAPK4P31152 587 aa22.8■■□□□ 1.24
SS18-208ENST00000577751 FLT3LGP49771 235 aa22.8■■□□□ 1.24
SS18-208ENST00000577751 CCNA1P78396 465 aa22.8■■□□□ 1.24
SS18-208ENST00000577751 RCSD1Q6JBY9 416 aa22.8■■□□□ 1.24
SS18-208ENST00000577751 GMCL1Q96IK5 515 aa22.8■■□□□ 1.24
SS18-208ENST00000577751 LSG1Q9H089 658 aaKnown RBP22.8■■□□□ 1.24
SS18-208ENST00000577751 B4E1Z4 1266 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 KDM4AO75164 1064 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 IRF5Q13568 498 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 KIAA1211Q6ZU35 1233 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 RAET1EQ8TD07 263 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 TMEM47Q9BQJ4 181 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 KRT23Q9C075 422 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 CNNM2Q9H8M5 875 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 ZSWIM5Q9P217 1185 aa22.79■■□□□ 1.24
SS18-208ENST00000577751 VWA5AO00534 786 aa22.78■■□□□ 1.24
SS18-208ENST00000577751 CDC45O75419 566 aa22.78■■□□□ 1.24
SS18-208ENST00000577751 CAPN15O75808 1086 aa22.78■■□□□ 1.24
SS18-208ENST00000577751 TOP1P11387 765 aaKnown RBP22.78■■□□□ 1.24
SS18-208ENST00000577751 BMP3P12645 472 aa22.78■■□□□ 1.24
SS18-208ENST00000577751 SLC9C1Q4G0N8 1177 aa22.78■■□□□ 1.24
SS18-208ENST00000577751 SLF1Q9BQI6 1058 aa22.78■■□□□ 1.24
SS18-208ENST00000577751 RBM8AQ9Y5S9 174 aaKnown RBP22.78■■□□□ 1.24
SS18-208ENST00000577751 CENPFP49454 3210 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 TMEM132BQ14DG7 1078 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 GPR142Q7Z601 462 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 NBPF11Q86T75 865 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 DGKHQ86XP1 1220 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 PRPF38AQ8NAV1 312 aaKnown RBP22.77■■□□□ 1.24
SS18-208ENST00000577751 REPS2Q8NFH8 660 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 MOV10L1Q9BXT6 1211 aaKnown RBP22.77■■□□□ 1.24
SS18-208ENST00000577751 SPATC1LQ9H0A9 340 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 FEM1BQ9UK73 627 aa22.77■■□□□ 1.24
SS18-208ENST00000577751 MCCP23508 829 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 GRK4P32298 578 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 CCDC178Q5BJE1 867 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 PLEKHH3Q7Z736 793 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 IQCA1Q86XH1 822 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 SHCBP1Q8NEM2 672 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 PXYLP1Q8TE99 480 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 ANKS1AQ92625 1134 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 ZNF333Q96JL9 665 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 ZKSCAN3Q9BRR0 538 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 TAF6LQ9Y6J9 622 aa22.76■■□□□ 1.23
SS18-208ENST00000577751 PLA2G6O60733 806 aa22.75■■□□□ 1.23
SS18-208ENST00000577751 SLC1A4P43007 532 aa22.75■■□□□ 1.23
SS18-208ENST00000577751 NECTIN1Q15223 517 aa22.75■■□□□ 1.23
SS18-208ENST00000577751 SAMD1Q6SPF0 538 aaPredicted RBP22.75■■□□□ 1.23
SS18-208ENST00000577751 CASC1Q6TDU7 716 aa22.75■■□□□ 1.23
SS18-208ENST00000577751 CCAR1Q8IX12 1150 aaKnown RBP22.75■■□□□ 1.23
SS18-208ENST00000577751 SLAIN1Q8ND83 568 aa22.75■■□□□ 1.23
SS18-208ENST00000577751 SH3TC2Q8TF17 1288 aa22.75■■□□□ 1.23
SS18-208ENST00000577751 USP6NLQ92738 828 aa22.75■■□□□ 1.23
SS18-208ENST00000577751 ZNF214Q9UL59 606 aaPredicted RBP22.75■■□□□ 1.23
SS18-208ENST00000577751 E7EWF7 191 aa22.74■■□□□ 1.23
SS18-208ENST00000577751 ADCY3O60266 1144 aa22.74■■□□□ 1.23
SS18-208ENST00000577751 MORN1Q5T089 497 aa22.74■■□□□ 1.23
SS18-208ENST00000577751 STOX1Q6ZVD7 989 aa22.74■■□□□ 1.23
SS18-208ENST00000577751 SOCS4Q8WXH5 440 aa22.74■■□□□ 1.23
SS18-208ENST00000577751 ZSCAN10Q96SZ4 725 aaPredicted RBP22.74■■□□□ 1.23
SS18-208ENST00000577751 NUDT12Q9BQG2 462 aa22.74■■□□□ 1.23
SS18-208ENST00000577751 ANO2Q9NQ90 1003 aa22.74■■□□□ 1.23
SS18-208ENST00000577751 TMEM232C9JQI7 657 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 PTPREP23469 700 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 STAT2P52630 851 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 TRDNQ13061 729 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 CYB5R4Q7L1T6 521 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 RASGRP2Q7LDG7 609 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 FAM160B2Q86V87 743 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 ENAHQ8N8S7 591 aaPredicted RBP22.73■■□□□ 1.23
SS18-208ENST00000577751 CHURC1Q8WUH1 139 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 DCAF4Q8WV16 495 aa22.73■■□□□ 1.23
SS18-208ENST00000577751 ATP2A1O14983 1001 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 XRCC5P13010 732 aaKnown RBP22.72■■□□□ 1.23
SS18-208ENST00000577751 ERCC3P19447 782 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 STAT3P40763 770 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 PLS1Q14651 629 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 KCTD1Q719H9 257 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 RIOX2Q8IUF8 465 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 KIFC2Q96AC6 838 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 MROH8Q9H579 483 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 SLC38A10Q9HBR0 1119 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 TNKSO95271 1327 aa22.72■■□□□ 1.23
SS18-208ENST00000577751 RBBP6Q7Z6E9 1792 aaKnown RBP22.71■■□□□ 1.23
SS18-208ENST00000577751 SLC15A5A6NIM6 579 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 STRNO43815 780 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 SLC25A27O95847 323 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 SNHG28P0DPA3 235 aa22.71■■□□□ 1.23
SS18-208ENST00000577751 FDX1P10109 184 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms