RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 NECTIN1Q15223 517 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 OTOP1Q7RTM1 612 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TNS4Q8IZW8 715 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 DCAF4Q8WV16 495 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 GMCL1Q96IK5 515 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ZSCAN10Q96SZ4 725 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 SLF1Q9BQI6 1058 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TMEM47Q9BQJ4 181 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ZSWIM5Q9P217 1185 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TNKSO95271 1327 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ERICH2A1L162 156 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 FMNL1O95466 1100 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 PSMC4P43686 418 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 RCSD1Q6JBY9 416 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ANKS1AQ92625 1134 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ZKSCAN3Q9BRR0 538 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 KAT14Q9H8E8 782 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 FEM1BQ9UK73 627 aa14.93□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TNPO2O14787 897 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 MAPK4P31152 587 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 KRT32Q14532 448 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 CCDC96Q2M329 555 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 FBXO46Q6PJ61 603 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 STOX1Q6ZVD7 989 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 FAM160B2Q86V87 743 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ENAHQ8N8S7 591 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 CHURC1Q8WUH1 139 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 COA7Q96BR5 231 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ATG4CQ96DT6 458 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 MCOLN1Q9GZU1 580 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 RBPJLQ9UBG7 517 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ZSWIM8A7E2V4 1837 aa14.92□□□□□ -0.02
CDK5RAP3-203ENST00000577442 PLA2G6O60733 806 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 FDX1P10109 184 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 MCCP23508 829 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 MCM5P33992 734 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 STAT2P52630 851 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 IKQ13123 557 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 IFIT1BQ5T764 474 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 MB21D2Q8IYB1 491 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 PRPF38AQ8NAV1 312 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 PNMA1Q8ND90 353 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TRIM47Q96LD4 638 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 MTA3Q9BTC8 594 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TXNRD2Q9NNW7 524 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 FBXO28Q9NVF7 368 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 CTDP1Q9Y5B0 961 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TAF6LQ9Y6J9 622 aa14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 COL11A1P12107 1806 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TMEM232C9JQI7 657 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 CNMDO75829 334 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 COPB2P35606 906 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 TSGA10IPQ3SY00 556 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 CYB5R4Q7L1T6 521 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 NKX2-3Q8TAU0 364 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 SRRDQ9UH36 339 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 ADAMTS5Q9UNA0 930 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 MTMR7Q9Y216 660 aa14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 KIAA0100Q14667 2235 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-203ENST00000577442 VWA5AO00534 786 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 ZBED4O75132 1171 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 PDHBP11177 359 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 PLS1Q14651 629 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 WTAPQ15007 396 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 SEC23AQ15436 765 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 TMEM67Q5HYA8 995 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 GPATCH4Q5T3I0 446 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 KCTD1Q719H9 257 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 SHCBP1Q8NEM2 672 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 SOCS4Q8WXH5 440 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 KIFC2Q96AC6 838 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 SPATC1LQ9H0A9 340 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 BTBD7Q9P203 1132 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 PTPN22Q9Y2R2 807 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 IVNS1ABPQ9Y6Y0 642 aa14.89□□□□□ -0.03
CDK5RAP3-203ENST00000577442 PRC1O43663 620 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 ECM2O94769 699 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 SLC25A27O95847 323 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 HMGB1P09429 215 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 SNHG28P0DPA3 235 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 CTGFP29279 349 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 HSPA4P34932 840 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 ZNF543Q08ER8 600 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 ASPRV1Q53RT3 343 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 WDR78Q5VTH9 848 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 POTEEQ6S8J3 1075 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 TMEM87BQ96K49 555 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 NEK1Q96PY6 1258 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
CDK5RAP3-203ENST00000577442 PEX10O60683 326 aa14.87□□□□□ -0.03
CDK5RAP3-203ENST00000577442 OAZ1P54368 228 aa14.87□□□□□ -0.03
CDK5RAP3-203ENST00000577442 ANTXR2P58335 489 aa14.87□□□□□ -0.03
CDK5RAP3-203ENST00000577442 CAP1Q01518 475 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms