RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
CCDC40-216ENST00000576241 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
CCDC40-216ENST00000576241 KIAA1755Q5JYT7 1200 aa16.4■□□□□ 0.22
CCDC40-216ENST00000576241 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
CCDC40-216ENST00000576241 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
CCDC40-216ENST00000576241 MOV10L1Q9BXT6 1211 aaKnown RBP16.4■□□□□ 0.22
CCDC40-216ENST00000576241 SPATC1LQ9H0A9 340 aa16.4■□□□□ 0.22
CCDC40-216ENST00000576241 STRNO43815 780 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 COL6A1P12109 1028 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
CCDC40-216ENST00000576241 GNAT2P19087 354 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 DSG3P32926 999 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
CCDC40-216ENST00000576241 DPP9Q86TI2 863 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 SHCBP1Q8NEM2 672 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
CCDC40-216ENST00000576241 GSG1L2A8MUP6 293 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 RAD21O60216 631 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 FOSL2P15408 326 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 ERCC3P19447 782 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 ADORA2AP29274 412 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 TDO2P48775 406 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 SBK1Q52WX2 424 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 ATG4CQ96DT6 458 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 LBHD1Q9BQE6 289 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-216ENST00000576241 TTYH1Q9H313 450 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-216ENST00000576241 MROH8Q9H579 483 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 FLRT1Q9NZU1 646 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-216ENST00000576241 PCDHB15Q9Y5E8 787 aa16.38■□□□□ 0.21
CCDC40-216ENST00000576241 MYH7P12883 1935 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
CCDC40-216ENST00000576241 MINDY4BA8MYZ0 360 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 GPAA1O43292 621 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 MSCO60682 206 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 APPP05067 770 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 CNGA1P29973 690 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
CCDC40-216ENST00000576241 LHX8Q68G74 356 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 NCAPG2Q86XI2 1143 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 NPLOC4Q8TAT6 608 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 SLC5A4Q9NY91 659 aa16.37■□□□□ 0.21
CCDC40-216ENST00000576241 CYP2C19P33261 490 aa16.36■□□□□ 0.21
CCDC40-216ENST00000576241 OLFML2BQ68BL8 750 aa16.36■□□□□ 0.21
CCDC40-216ENST00000576241 ABRAQ8N0Z2 381 aa16.36■□□□□ 0.21
CCDC40-216ENST00000576241 STK11IPQ8N1F8 1099 aa16.36■□□□□ 0.21
CCDC40-216ENST00000576241 DDX20Q9UHI6 824 aaKnown RBP16.36■□□□□ 0.21
CCDC40-216ENST00000576241 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
CCDC40-216ENST00000576241 MYH8P13535 1937 aa16.35■□□□□ 0.21
CCDC40-216ENST00000576241 SLC25A27O95847 323 aa16.35■□□□□ 0.21
CCDC40-216ENST00000576241 FCER1AP12319 257 aa16.35■□□□□ 0.21
CCDC40-216ENST00000576241 RASA1P20936 1047 aa16.35■□□□□ 0.21
CCDC40-216ENST00000576241 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
CCDC40-216ENST00000576241 NACAP1Q9BZK3 213 aa16.35■□□□□ 0.21
CCDC40-216ENST00000576241 A0A0G2JMZ2 1700 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 M0R2C6 588 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 MX1P20591 662 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 TMEM132BQ14DG7 1078 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 SHHQ15465 462 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-216ENST00000576241 USP38Q8NB14 1042 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 PI4K2BQ8TCG2 481 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-216ENST00000576241 FBXO28Q9NVF7 368 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 NYAP2Q9P242 653 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 DNAH12Q6ZR08 3092 aa16.34■□□□□ 0.21
CCDC40-216ENST00000576241 NCOR1O75376 2440 aa16.33■□□□□ 0.2
CCDC40-216ENST00000576241 PATL2C9JE40 543 aaKnown RBP16.33■□□□□ 0.2
CCDC40-216ENST00000576241 OTUD7AQ8TE49 926 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-216ENST00000576241 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC40-216ENST00000576241 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
CCDC40-216ENST00000576241 ADAMTS5Q9UNA0 930 aa16.33■□□□□ 0.2
CCDC40-216ENST00000576241 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.2
CCDC40-216ENST00000576241 VWA5AO00534 786 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 COBLO75128 1261 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
CCDC40-216ENST00000576241 CYBAP13498 195 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 COPB2P35606 906 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 KCTD2Q14681 263 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 C9orf50Q5SZB4 431 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 MMP19Q99542 508 aa16.32■□□□□ 0.2
CCDC40-216ENST00000576241 LTBP2Q14767 1821 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 F5H6K3 240 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 IGHA2P01877 340 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 STAT3P40763 770 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 PDE4BQ07343 736 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 KLRC3Q07444 240 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 TRPV1Q8NER1 839 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 NUP88Q99567 741 aaPredicted RBP16.31■□□□□ 0.2
CCDC40-216ENST00000576241 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
CCDC40-216ENST00000576241 NAPBQ9H115 298 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms