RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 MTRQ99707 1265 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 TCHPQ9BT92 498 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 OSBPL1AQ9BXW6 950 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 UPF3BQ9BZI7 483 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 GOLPH3LQ9H4A5 285 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 DCTPP1Q9H773 170 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 AATFQ9NY61 560 aaKnown RBP eCLIP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 CTNNAL1Q9UBT7 734 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 NOB1Q9ULX3 412 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 LIMCH1Q9UPQ0 1083 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF148Q9UQR1 794 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 SAMM50Q9Y512 469 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 MROH2AA6NES4 1674 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 KDM5AP29375 1690 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ZC3H13Q5T200 1668 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 NUP155O75694 1391 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 STX10O60499 249 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF202O95125 648 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ANP32DO95626 131 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 GSTA2P09210 222 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 NUTM2DQ5VT03 806 aaPredicted RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 CCDC73Q6ZRK6 1079 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 UBE3BQ7Z3V4 1068 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 RSPH3Q86UC2 560 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ANKRD13BQ86YJ7 626 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ARHGAP18Q8N392 663 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 SMC1BQ8NDV3 1235 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF473Q8WTR7 871 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF653Q96CK0 615 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 SPATA32Q96LK8 384 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 WDR24Q96S15 920 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 MAK16Q9BXY0 300 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 BHMT2Q9H2M3 363 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 GALNT8Q9NY28 637 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 BZW2Q9Y6E2 419 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 SLC4A7Q9Y6M7 1214 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 IQGAP1P46940 1657 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 LMTK2Q8IWU2 1503 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 CHD2O14647 1828 aaKnown RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 KDM6AO15550 1401 aaPredicted RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 CAMSAP1Q5T5Y3 1602 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 SLC27A2O14975 620 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 ZBTB7BO15156 539 aaPredicted RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 TIMM44O43615 452 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 PFKFB2O60825 505 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 FLOT1O75955 427 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 CCND1P24385 295 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 HDAC4P56524 1084 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 SLC7A5Q01650 507 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 BTG3Q14201 252 aaPredicted RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 SKIDA1Q1XH10 827 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 ACCSLQ4AC99 568 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 ANKRD20A8PQ5CZ79 823 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 KDM7AQ6ZMT4 941 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 C11orf57Q6ZUT1 292 aaPredicted RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 TMEM110Q86TL2 294 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 METTL3Q86U44 580 aaKnown RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 C1orf131Q8NDD1 294 aaKnown RBP8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 EHBP1Q8NDI1 1231 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 KLHDC4Q8TBB5 520 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 STAMBPL1Q96FJ0 436 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF570Q96NI8 536 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 VCXQ9H320 206 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 MAPK8IP1Q9UQF2 711 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 C2CD2Q9Y426 696 aa8.88□□□□□ -0.99
TOM1L1-220ENST00000575333 BIRC5O15392 142 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 ALADP13716 330 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 IBSPP21815 317 aaPredicted RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 GGCXP38435 758 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 ELF3P78545 371 aaPredicted RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 CBX3Q13185 183 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 IFI16Q16666 785 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 ZNF394Q53GI3 561 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 ALS2CLQ60I27 953 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 MAATS1Q7Z4T9 603 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 ANKRD44Q8N8A2 993 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 ARL10Q8N8L6 244 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 SMC6Q96SB8 1091 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 ESYT1Q9BSJ8 1104 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 FAM192AQ9GZU8 254 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 RETREG1Q9H6L5 497 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 PICK1Q9NRD5 415 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.87□□□□□ -0.994e-6■■■■□ 20.4
TOM1L1-220ENST00000575333 HAUS2Q9NVX0 235 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 TBC1D7Q9P0N9 293 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 CROTQ9UKG9 612 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 VWDEQ8N2E2 1590 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 CTAGE9A4FU28 777 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 N4BP3O15049 544 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 TOP1P11387 765 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 CCT6AP40227 531 aaKnown RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 KIF5AQ12840 1032 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 AMHR2Q16671 573 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 NCCRP1Q6ZVX7 275 aaPredicted RBP8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 AOPEPQ8N6M6 819 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 PXYLP1Q8TE99 480 aa8.87□□□□□ -0.99
TOM1L1-220ENST00000575333 SPIRE2Q8WWL2 714 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms