RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 MCM7P33993 719 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 MTF1Q14872 753 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 FILIP1LQ4L180 1135 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 ARL6IP4Q66PJ3 421 aaKnown RBP10.14□□□□□ -0.79
NCBP3-204ENST00000574911 SPTY2D1Q68D10 685 aaPredicted RBP10.14□□□□□ -0.79
NCBP3-204ENST00000574911 TXNRD3Q86VQ6 643 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 PPFIBP1Q86W92 1011 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 NBPF5PQ86XG9 351 aaPredicted RBP10.14□□□□□ -0.79
NCBP3-204ENST00000574911 DGKHQ86XP1 1220 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 BLIDQ8IZY5 108 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 FAM177A1Q8N128 213 aaPredicted RBP10.14□□□□□ -0.79
NCBP3-204ENST00000574911 STAMQ92783 540 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 DESI2Q9BSY9 194 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 BLZF1Q9H2G9 400 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 IL17RBQ9NRM6 502 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 RWDD2AQ9UIY3 292 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 CTNND2Q9UQB3 1225 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 LRRC10BA6NIK2 292 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 SOWAHDA6NJG2 315 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 IGSF3O75054 1194 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 TPM1P09493 284 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 FECHP22830 423 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 LONP1P36776 959 aaKnown RBP10.13□□□□□ -0.79
NCBP3-204ENST00000574911 BMS1Q14692 1282 aaKnown RBP10.13□□□□□ -0.79
NCBP3-204ENST00000574911 C12orf60Q5U649 245 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 RAD9BQ6WBX8 426 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 KAT14Q9H8E8 782 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 MRPL44Q9H9J2 332 aaKnown RBP10.13□□□□□ -0.79
NCBP3-204ENST00000574911 MCM9Q9NXL9 1143 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 MRFAP1Q9Y605 127 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
NCBP3-204ENST00000574911 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
NCBP3-204ENST00000574911 M0R2N6 131 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 MFAP3LO75121 409 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 CCDC175P0C221 793 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 TFAP4Q01664 338 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 GRM4Q14833 912 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 RRAGBQ5VZM2 374 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 CCDC51Q96ER9 411 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 PODXL2Q9NZ53 605 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 PCDHA4Q9UN74 947 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 ADGRG1Q9Y653 693 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 ROBO3Q96MS0 1386 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 FAM205AQ6ZU69 1335 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 ZNF658Q5TYW1 1059 aaPredicted RBP10.13□□□□□ -0.79
NCBP3-204ENST00000574911 DZIP1Q86YF9 867 aaKnown RBP10.13□□□□□ -0.79
NCBP3-204ENST00000574911 RMND1Q9NWS8 449 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 FHOD1Q9Y613 1164 aa10.13□□□□□ -0.79
NCBP3-204ENST00000574911 CCDC88AQ3V6T2 1871 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 ZRANB2O95218 330 aaKnown RBP eCLIP10.12□□□□□ -0.79
NCBP3-204ENST00000574911 KARSQ15046 597 aaKnown RBP10.12□□□□□ -0.79
NCBP3-204ENST00000574911 KRT31Q15323 416 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 TPTE2Q6XPS3 522 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 STAG2Q8N3U4 1231 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 TCP11L1Q9NUJ3 509 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 MAD2L2Q9UI95 211 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 JAG2Q9Y219 1238 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 COBLO75128 1261 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 RPN1P04843 607 aaKnown RBP10.12□□□□□ -0.79
NCBP3-204ENST00000574911 GYPCP04921 128 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 CASP14P31944 242 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 GNAQP50148 359 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 PPP2R3AQ06190 1150 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 SPAG1Q07617 926 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 PAK1Q13153 545 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
NCBP3-204ENST00000574911 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 RSRC2Q7L4I2 434 aaKnown RBP10.12□□□□□ -0.79
NCBP3-204ENST00000574911 RASGRP2Q7LDG7 609 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 PTF1AQ7RTS3 328 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 CNGA4Q8IV77 575 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 CCDC24Q8N4L8 307 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 DAGLBQ8NCG7 672 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 PNMA1Q8ND90 353 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 CPLX3Q8WVH0 158 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 NELFBQ8WX92 580 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
NCBP3-204ENST00000574911 DYNLL2Q96FJ2 89 aa10.12□□□□□ -0.79
NCBP3-204ENST00000574911 ARGLU1Q9NWB6 273 aaPredicted RBP10.12□□□□□ -0.79
NCBP3-204ENST00000574911 ZPR1O75312 459 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 USP5P45974 858 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 FXR1P51114 621 aaKnown RBP eCLIP10.11□□□□□ -0.79
NCBP3-204ENST00000574911 COPB1P53618 953 aaKnown RBP10.11□□□□□ -0.79
NCBP3-204ENST00000574911 SLC35G1Q2M3R5 365 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 SH3RF3Q8TEJ3 882 aaPredicted RBP10.11□□□□□ -0.79
NCBP3-204ENST00000574911 PCDHA6Q9UN73 950 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 PCDHA8Q9Y5H6 950 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 TNRC6CQ9HCJ0 1690 aaKnown RBP10.11□□□□□ -0.79
NCBP3-204ENST00000574911 SBF2Q86WG5 1849 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 KIF20AO95235 890 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 LDHBP07195 334 aaKnown RBP10.11□□□□□ -0.79
NCBP3-204ENST00000574911 TXLNAP40222 546 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 PPP4CP60510 307 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 TCP11X2Q5H9J9 407 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 WDR66Q8TBY9 1149 aa10.11□□□□□ -0.79
NCBP3-204ENST00000574911 PNMA6AP0CW24 399 aaPredicted RBP10.1□□□□□ -0.79
NCBP3-204ENST00000574911 CCT6AP40227 531 aaKnown RBP10.1□□□□□ -0.79
NCBP3-204ENST00000574911 TERF2Q15554 542 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms