RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 DEFB118Q96PH6 123 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 MOV10L1Q9BXT6 1211 aaKnown RBP12.58□□□□□ -0.4
LITAF-216ENST00000574848 NAPBQ9H115 298 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
LITAF-216ENST00000574848 HELLSQ9NRZ9 838 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 LAMA4Q16363 1823 aa12.58□□□□□ -0.4
LITAF-216ENST00000574848 ALPK3Q96L96 1907 aa12.57□□□□□ -0.4
LITAF-216ENST00000574848 APPP05067 770 aa12.57□□□□□ -0.4
LITAF-216ENST00000574848 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
LITAF-216ENST00000574848 PPARAQ07869 468 aa12.57□□□□□ -0.4
LITAF-216ENST00000574848 ABRAQ8N0Z2 381 aa12.57□□□□□ -0.4
LITAF-216ENST00000574848 MKL1Q969V6 931 aa12.57□□□□□ -0.4
LITAF-216ENST00000574848 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
LITAF-216ENST00000574848 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
LITAF-216ENST00000574848 PPP1R9AQ9ULJ8 1098 aa12.57□□□□□ -0.4
LITAF-216ENST00000574848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
LITAF-216ENST00000574848 STRNO43815 780 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 SLC34A2O95436 690 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 SLC3A2P08195 630 aaKnown RBP12.56□□□□□ -0.4
LITAF-216ENST00000574848 PDE4BQ07343 736 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 ALX1Q15699 326 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 CCL14Q16627 93 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 REPS2Q8NFH8 660 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 HTATIP2Q9BUP3 242 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 MROH8Q9H579 483 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 CWC22Q9HCG8 908 aaKnown RBP12.56□□□□□ -0.4
LITAF-216ENST00000574848 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 OGDHLQ9ULD0 1010 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 IVNS1ABPQ9Y6Y0 642 aa12.56□□□□□ -0.4
LITAF-216ENST00000574848 A0A0D9SFI3 127 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 PRDM1O75626 825 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 NDUFB10O96000 172 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 ERCC3P19447 782 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
LITAF-216ENST00000574848 ATP2B2Q01814 1243 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 CACNB2Q08289 660 aaPredicted RBP12.55□□□□□ -0.4
LITAF-216ENST00000574848 TMEM132BQ14DG7 1078 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 VPS53Q5VIR6 699 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 RIOX2Q8IUF8 465 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 PLEKHM2Q8IWE5 1019 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
LITAF-216ENST00000574848 GMCL1P1Q8NEA9 526 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
LITAF-216ENST00000574848 ZNF214Q9UL59 606 aaPredicted RBP12.55□□□□□ -0.4
LITAF-216ENST00000574848 F5H6K3 240 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 VWA5AO00534 786 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 SLC25A27O95847 323 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 TTLL1O95922 423 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 TFRCP02786 760 aaKnown RBP12.54□□□□□ -0.4
LITAF-216ENST00000574848 FGRP09769 529 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 ADORA2AP29274 412 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 COPB2P35606 906 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 NOVP48745 357 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 KLRC3Q07444 240 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 WDR78Q5VTH9 848 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 OLFML2BQ68BL8 750 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 STK11IPQ8N1F8 1099 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 NPLOC4Q8TAT6 608 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
LITAF-216ENST00000574848 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 ATP2A1O14983 1001 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 ORC4O43929 436 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 CDC45O75419 566 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 CYBAP13498 195 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 NMIQ13287 307 aaPredicted RBP12.53□□□□□ -0.4
LITAF-216ENST00000574848 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 MFSD14CQ5VZR4 134 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 LHX8Q68G74 356 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
LITAF-216ENST00000574848 ZNF589Q86UQ0 364 aaPredicted RBP12.53□□□□□ -0.4
LITAF-216ENST00000574848 SLF1Q9BQI6 1058 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 CCDC171Q6TFL3 1326 aa12.53□□□□□ -0.4
LITAF-216ENST00000574848 HSPD1P10809 573 aaKnown RBP12.52□□□□□ -0.41
LITAF-216ENST00000574848 CCND3P30281 292 aaPredicted RBP12.52□□□□□ -0.41
LITAF-216ENST00000574848 TFAP4Q01664 338 aa12.52□□□□□ -0.41
LITAF-216ENST00000574848 BECN1Q14457 450 aa12.52□□□□□ -0.41
LITAF-216ENST00000574848 TTC22Q5TAA0 569 aa12.52□□□□□ -0.41
LITAF-216ENST00000574848 NECAB2Q7Z6G3 386 aa12.52□□□□□ -0.41
LITAF-216ENST00000574848 DIS3LQ8TF46 1054 aaKnown RBP12.52□□□□□ -0.41
LITAF-216ENST00000574848 GMCL1Q96IK5 515 aa12.52□□□□□ -0.41
LITAF-216ENST00000574848 PAWRQ96IZ0 340 aaKnown RBP12.52□□□□□ -0.41
LITAF-216ENST00000574848 NUP88Q99567 741 aaPredicted RBP12.52□□□□□ -0.41
LITAF-216ENST00000574848 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
LITAF-216ENST00000574848 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.41
LITAF-216ENST00000574848 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 H0YGN5 161 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 MSCO60682 206 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 COBLO75128 1261 aa12.51□□□□□ -0.41
LITAF-216ENST00000574848 FGAP02671 866 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms