RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.97□□□□□ -0.49
NCBP3-203ENST00000574379 PI4KBQ9UBF8 816 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 DDX20Q9UHI6 824 aaKnown RBP11.97□□□□□ -0.49
NCBP3-203ENST00000574379 SAP30BPQ9UHR5 308 aaKnown RBP11.97□□□□□ -0.49
NCBP3-203ENST00000574379 PALD1Q9ULE6 856 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 NCOR1O75376 2440 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 GREB1LQ9C091 1923 aaPredicted RBP11.96□□□□□ -0.49
NCBP3-203ENST00000574379 LAMA4Q16363 1823 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 PDE4AP27815 886 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 PABPC4Q13310 644 aaKnown RBP eCLIP11.96□□□□□ -0.49
NCBP3-203ENST00000574379 MFSD14CQ5VZR4 134 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 LPAR1Q92633 364 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
NCBP3-203ENST00000574379 OSBP2Q969R2 916 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 FERMT2Q96AC1 680 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 EVI5LQ96CN4 794 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 PBX4Q9BYU1 374 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 DNAJC18Q9H819 358 aa11.96□□□□□ -0.49
NCBP3-203ENST00000574379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.96□□□□□ -0.49
NCBP3-203ENST00000574379 HERC5Q9UII4 1024 aaKnown RBP11.96□□□□□ -0.49
NCBP3-203ENST00000574379 PRKAB2O43741 272 aa11.95□□□□□ -0.5
NCBP3-203ENST00000574379 PEX10O60683 326 aa11.95□□□□□ -0.5
NCBP3-203ENST00000574379 XRCC5P13010 732 aaKnown RBP11.95□□□□□ -0.5
NCBP3-203ENST00000574379 RRP1BQ14684 758 aaKnown RBP11.95□□□□□ -0.5
NCBP3-203ENST00000574379 LRRFIP1Q32MZ4 808 aaKnown RBP11.95□□□□□ -0.5
NCBP3-203ENST00000574379 ANO1Q5XXA6 986 aa11.95□□□□□ -0.5
NCBP3-203ENST00000574379 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
NCBP3-203ENST00000574379 STRBPQ96SI9 672 aaKnown RBP11.95□□□□□ -0.5
NCBP3-203ENST00000574379 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
NCBP3-203ENST00000574379 MYH4Q9Y623 1939 aa11.95□□□□□ -0.5
NCBP3-203ENST00000574379 FRMPD3Q5JV73 1810 aa11.95□□□□□ -0.5
NCBP3-203ENST00000574379 PRR33A8MZF0 331 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 M0R2C6 588 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 MSCO60682 206 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
NCBP3-203ENST00000574379 HLA-DOAP06340 250 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
NCBP3-203ENST00000574379 ITGB8P26012 769 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 IRX3P78415 501 aaPredicted RBP11.94□□□□□ -0.5
NCBP3-203ENST00000574379 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 WDR78Q5VTH9 848 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 ARRDC4Q8NCT1 418 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
NCBP3-203ENST00000574379 EHD4Q9H223 541 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 ATP8A2Q9NTI2 1148 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 MCM9Q9NXL9 1143 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 MSRAQ9UJ68 235 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 PLXNB2O15031 1838 aa11.94□□□□□ -0.5
NCBP3-203ENST00000574379 GPAA1O43292 621 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 CLTBP09497 229 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 CAP2P40123 477 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 PLCD1P51178 756 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 HMGCS2P54868 508 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 TTC6Q86TZ1 520 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 TICAM2Q86XR7 235 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 CRACR2BQ8N4Y2 399 aaPredicted RBP11.93□□□□□ -0.5
NCBP3-203ENST00000574379 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
NCBP3-203ENST00000574379 GPRC5AQ8NFJ5 357 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 FBXL18Q96ME1 805 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 SEC62Q99442 399 aaKnown RBP11.93□□□□□ -0.5
NCBP3-203ENST00000574379 APBA2Q99767 749 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 TACC3Q9Y6A5 838 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
NCBP3-203ENST00000574379 GSG1L2A8MUP6 293 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 PQBP1O60828 265 aaKnown RBP11.92□□□□□ -0.5
NCBP3-203ENST00000574379 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
NCBP3-203ENST00000574379 CYP2D6P10635 497 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 ADCYAP1R1P41586 468 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 TLE2Q04725 743 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 GABPAQ06546 454 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 SPP2Q13103 211 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 CENPQQ7L2Z9 268 aaPredicted RBP11.92□□□□□ -0.5
NCBP3-203ENST00000574379 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
NCBP3-203ENST00000574379 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 PAGR1Q9BTK6 254 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 NKX2-4Q9H2Z4 354 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 SLC28A3Q9HAS3 691 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 SERPINB13Q9UIV8 391 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 PARP14Q460N5 1801 aa11.92□□□□□ -0.5
NCBP3-203ENST00000574379 PI4K2BG5E9Z4 385 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 NEFLP07196 543 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 MAPK4P31152 587 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 SHMT1P34896 483 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 JAG1P78504 1218 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 FOXK2Q01167 660 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 ATP2B2Q01814 1243 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 C12orf60Q5U649 245 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 TATDN1Q6P1N9 297 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 GIMAP6Q6P9H5 292 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 GPR142Q7Z601 462 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 SPOCK2Q92563 424 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
NCBP3-203ENST00000574379 EPB41L4AQ9HCS5 686 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms