RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 CAPN2P17655 700 aa31.01■■■□□ 2.55
NPLOC4-215ENST00000574095 ERCC3P19447 782 aa31.01■■■□□ 2.55
NPLOC4-215ENST00000574095 FAM47AQ5JRC9 791 aa31.01■■■□□ 2.55
NPLOC4-215ENST00000574095 RILPL2Q969X0 211 aa31.01■■■□□ 2.55
NPLOC4-215ENST00000574095 NUP88Q99567 741 aaPredicted RBP31.01■■■□□ 2.55
NPLOC4-215ENST00000574095 FLRT1Q9NZU1 646 aa31.01■■■□□ 2.55
NPLOC4-215ENST00000574095 F5H6K3 240 aa31■■■□□ 2.55
NPLOC4-215ENST00000574095 KLRC3Q07444 240 aa31■■■□□ 2.55
NPLOC4-215ENST00000574095 PLEKHM2Q8IWE5 1019 aa31■■■□□ 2.55
NPLOC4-215ENST00000574095 SHCBP1Q8NEM2 672 aa31■■■□□ 2.55
NPLOC4-215ENST00000574095 NPLOC4Q8TAT6 608 aa31■■■□□ 2.55
NPLOC4-215ENST00000574095 CEP95Q96GE4 821 aa31■■■□□ 2.55
NPLOC4-215ENST00000574095 ADAMTS5Q9UNA0 930 aa31■■■□□ 2.55
NPLOC4-215ENST00000574095 A0A0D9SFI3 127 aa30.99■■■□□ 2.55
NPLOC4-215ENST00000574095 CTDSPL2Q05D32 466 aa30.99■■■□□ 2.55
NPLOC4-215ENST00000574095 TMEM132BQ14DG7 1078 aa30.99■■■□□ 2.55
NPLOC4-215ENST00000574095 NCAPG2Q86XI2 1143 aa30.99■■■□□ 2.55
NPLOC4-215ENST00000574095 MTMR4Q9NYA4 1195 aa30.99■■■□□ 2.55
NPLOC4-215ENST00000574095 NDUFB10O96000 172 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 TSPY3P0CV98 308 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 TSPY8P0CW00 308 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 CCND3P30281 292 aaPredicted RBP30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 TFAP4Q01664 338 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 MCMDC2Q4G0Z9 681 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 NEDD1Q8NHV4 660 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 PAWRQ96IZ0 340 aaKnown RBP30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 HTATIP2Q9BUP3 242 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 INCENPQ9NQS7 918 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 PPP1R9AQ9ULJ8 1098 aa30.98■■■□□ 2.55
NPLOC4-215ENST00000574095 STRNO43815 780 aa30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 HOXC6P09630 235 aa30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 ADORA2AP29274 412 aa30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 NMIQ13287 307 aaPredicted RBP30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 DPP9Q86TI2 863 aa30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 DIS3LQ8TF46 1054 aaKnown RBP30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 MKL1Q969V6 931 aa30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 MROH8Q9H579 483 aa30.97■■■□□ 2.55
NPLOC4-215ENST00000574095 IRX6P78412 446 aaPredicted RBP30.96■■■□□ 2.55
NPLOC4-215ENST00000574095 OSBPL3Q9H4L5 887 aa30.96■■■□□ 2.55
NPLOC4-215ENST00000574095 H0YGN5 161 aa30.95■■■□□ 2.55
NPLOC4-215ENST00000574095 VWA5AO00534 786 aa30.95■■■□□ 2.55
NPLOC4-215ENST00000574095 TTLL1O95922 423 aa30.95■■■□□ 2.55
NPLOC4-215ENST00000574095 MFSD14CQ5VZR4 134 aa30.95■■■□□ 2.55
NPLOC4-215ENST00000574095 TICAM2Q86XR7 235 aa30.95■■■□□ 2.55
NPLOC4-215ENST00000574095 LRRC47Q8N1G4 583 aaKnown RBP30.95■■■□□ 2.55
NPLOC4-215ENST00000574095 ZNFX1Q9P2E3 1918 aaKnown RBP30.94■■■□□ 2.54
NPLOC4-215ENST00000574095 ANKLE1Q8NAG6 615 aa30.94■■■□□ 2.54
NPLOC4-215ENST00000574095 SLF1Q9BQI6 1058 aa30.94■■■□□ 2.54
NPLOC4-215ENST00000574095 OGDHLQ9ULD0 1010 aa30.94■■■□□ 2.54
NPLOC4-215ENST00000574095 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.94■■■□□ 2.54
NPLOC4-215ENST00000574095 TACC3Q9Y6A5 838 aa30.94■■■□□ 2.54
NPLOC4-215ENST00000574095 ZNF236Q9UL36 1845 aa30.94■■■□□ 2.54
NPLOC4-215ENST00000574095 PLIN4Q96Q06 1357 aa30.93■■■□□ 2.54
NPLOC4-215ENST00000574095 COBLO75128 1261 aa30.93■■■□□ 2.54
NPLOC4-215ENST00000574095 ALX1Q15699 326 aa30.93■■■□□ 2.54
NPLOC4-215ENST00000574095 NECAB2Q7Z6G3 386 aa30.93■■■□□ 2.54
NPLOC4-215ENST00000574095 ZNF589Q86UQ0 364 aaPredicted RBP30.93■■■□□ 2.54
NPLOC4-215ENST00000574095 REPS2Q8NFH8 660 aa30.93■■■□□ 2.54
NPLOC4-215ENST00000574095 SLC25A27O95847 323 aa30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 FGAP02671 866 aa30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 SDSP20132 328 aa30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 CYP2C19P33261 490 aa30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 STAT3P40763 770 aa30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 MNX1P50219 401 aaPredicted RBP30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 RIOX2Q8IUF8 465 aa30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 ANAPC4Q9UJX5 808 aa30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 ZNF214Q9UL59 606 aaPredicted RBP30.92■■■□□ 2.54
NPLOC4-215ENST00000574095 HSPD1P10809 573 aaKnown RBP30.91■■■□□ 2.54
NPLOC4-215ENST00000574095 LHX8Q68G74 356 aa30.91■■■□□ 2.54
NPLOC4-215ENST00000574095 TSPY2A6NKD2 308 aa30.9■■■□□ 2.54
NPLOC4-215ENST00000574095 FCER1AP12319 257 aa30.9■■■□□ 2.54
NPLOC4-215ENST00000574095 ABRAQ8N0Z2 381 aa30.9■■■□□ 2.54
NPLOC4-215ENST00000574095 PRPF38AQ8NAV1 312 aaKnown RBP30.9■■■□□ 2.54
NPLOC4-215ENST00000574095 GMCL1P1Q8NEA9 526 aa30.9■■■□□ 2.54
NPLOC4-215ENST00000574095 SYNPO2Q9UMS6 1093 aa30.9■■■□□ 2.54
NPLOC4-215ENST00000574095 RANBP6O60518 1105 aaKnown RBP30.89■■■□□ 2.54
NPLOC4-215ENST00000574095 SLFN13Q68D06 897 aa30.89■■■□□ 2.54
NPLOC4-215ENST00000574095 CCDC171Q6TFL3 1326 aa30.89■■■□□ 2.54
NPLOC4-215ENST00000574095 NMT2O60551 498 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 IGHA2P01877 340 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 CNGA1P29973 690 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 KIFC2Q96AC6 838 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 CHMP4CQ96CF2 233 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 MMP19Q99542 508 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 NBPF3Q9H094 633 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 IL17RBQ9NRM6 502 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 SLC5A4Q9NY91 659 aa30.88■■■□□ 2.53
NPLOC4-215ENST00000574095 ALPK3Q96L96 1907 aa30.87■■■□□ 2.53
NPLOC4-215ENST00000574095 BMP3P12645 472 aa30.87■■■□□ 2.53
NPLOC4-215ENST00000574095 OLFML2BQ68BL8 750 aa30.87■■■□□ 2.53
NPLOC4-215ENST00000574095 TRPV1Q8NER1 839 aa30.87■■■□□ 2.53
NPLOC4-215ENST00000574095 STX8Q9UNK0 236 aa30.87■■■□□ 2.53
NPLOC4-215ENST00000574095 EVI5O60447 810 aa30.86■■■□□ 2.53
NPLOC4-215ENST00000574095 C11orf49Q9H6J7 331 aa30.86■■■□□ 2.53
NPLOC4-215ENST00000574095 TOMM22Q9NS69 142 aa30.86■■■□□ 2.53
NPLOC4-215ENST00000574095 FEM1BQ9UK73 627 aa30.86■■■□□ 2.53
NPLOC4-215ENST00000574095 NR2E3Q9Y5X4 410 aa30.86■■■□□ 2.53
NPLOC4-215ENST00000574095 FRMPD3Q5JV73 1810 aa30.86■■■□□ 2.53
NPLOC4-215ENST00000574095 CEP290O15078 2479 aa30.85■■■□□ 2.53
NPLOC4-215ENST00000574095 ORC4O43929 436 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms