RNA–Protein interactions for RNA: ENST00000574048.2

ABR-224, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-224ENST00000574048 SHHQ15465 462 aa19.32■□□□□ 0.68
ABR-224ENST00000574048 TRIM60Q495X7 471 aa19.32■□□□□ 0.68
ABR-224ENST00000574048 SLFNL1Q499Z3 407 aa19.32■□□□□ 0.68
ABR-224ENST00000574048 C16orf86Q6ZW13 317 aa19.32■□□□□ 0.68
ABR-224ENST00000574048 SIRT2Q8IXJ6 389 aa19.32■□□□□ 0.68
ABR-224ENST00000574048 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.32■□□□□ 0.68
ABR-224ENST00000574048 CYP2D7A0A087X1C5 515 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 USP17L12C9JPN9 530 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 USP17L21D6R901 530 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 SMIM22K7EJ46 135 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
ABR-224ENST00000574048 FAM47AQ5JRC9 791 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 ZNF697Q5TEC3 545 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 RIOX2Q8IUF8 465 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 AMOTL1Q8IY63 956 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 BOLA2Q9H3K6 86 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 KANSL2Q9H9L4 492 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 PRDM5Q9NQX1 630 aaPredicted RBP19.31■□□□□ 0.68
ABR-224ENST00000574048 PDLIM7Q9NR12 457 aa19.31■□□□□ 0.68
ABR-224ENST00000574048 EEF2P13639 858 aaKnown RBP19.3■□□□□ 0.68
ABR-224ENST00000574048 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 C9orf50Q5SZB4 431 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 SAMD1Q6SPF0 538 aaPredicted RBP19.3■□□□□ 0.68
ABR-224ENST00000574048 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.3■□□□□ 0.68
ABR-224ENST00000574048 BADQ92934 168 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 FERMT2Q96AC1 680 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 FAM161BQ96MY7 647 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 MMP19Q99542 508 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 HAUS7Q99871 368 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 ZBTB40Q9NUA8 1239 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 PHF24Q9UPV7 400 aa19.3■□□□□ 0.68
ABR-224ENST00000574048 DIS3Q9Y2L1 958 aaKnown RBP19.3■□□□□ 0.68
ABR-224ENST00000574048 ZBED9Q6R2W3 1325 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 TRIM43BA6NCK2 446 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 ZNF792Q3KQV3 632 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 SH3RF1Q7Z6J0 888 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 TRIM43Q96BQ3 446 aaPredicted RBP19.29■□□□□ 0.68
ABR-224ENST00000574048 DDRGK1Q96HY6 314 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 TINF2Q9BSI4 451 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 FBXO28Q9NVF7 368 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 ROBO3Q96MS0 1386 aa19.29■□□□□ 0.68
ABR-224ENST00000574048 VWA5AO00534 786 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 PGK2P07205 417 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 RARBP10826 455 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 STAT3P40763 770 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 KCTD2Q14681 263 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 COL25A1Q9BXS0 654 aaPredicted RBP19.28■□□□□ 0.68
ABR-224ENST00000574048 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 GOPCQ9HD26 462 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 XPNPEP3Q9NQH7 507 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 PPP1R9AQ9ULJ8 1098 aa19.28■□□□□ 0.68
ABR-224ENST00000574048 GREB1LQ9C091 1923 aaPredicted RBP19.27■□□□□ 0.68
ABR-224ENST00000574048 CHGBP05060 677 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 COPB2P35606 906 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 SMAD3P84022 425 aaKnown RBP19.27■□□□□ 0.68
ABR-224ENST00000574048 TLE2Q04725 743 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 CTR9Q6PD62 1173 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 REPS2Q8NFH8 660 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 CDX2Q99626 313 aaPredicted RBP19.27■□□□□ 0.68
ABR-224ENST00000574048 SEMA6BQ9H3T3 888 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 ZNF214Q9UL59 606 aaPredicted RBP19.27■□□□□ 0.68
ABR-224ENST00000574048 TACC3Q9Y6A5 838 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 SLC4A4Q9Y6R1 1079 aa19.27■□□□□ 0.68
ABR-224ENST00000574048 ZNF865P0CJ78 1059 aaPredicted RBP19.26■□□□□ 0.67
ABR-224ENST00000574048 RNF180Q86T96 592 aa19.26■□□□□ 0.67
ABR-224ENST00000574048 COG6Q9Y2V7 657 aa19.26■□□□□ 0.67
ABR-224ENST00000574048 PGK1P00558 417 aa19.25■□□□□ 0.67
ABR-224ENST00000574048 TAL1P17542 331 aaPredicted RBP19.25■□□□□ 0.67
ABR-224ENST00000574048 FAM83BQ5T0W9 1011 aa19.25■□□□□ 0.67
ABR-224ENST00000574048 ZSCAN25Q6NSZ9 544 aa19.25■□□□□ 0.67
ABR-224ENST00000574048 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.25■□□□□ 0.67
ABR-224ENST00000574048 PUS7LQ9H0K6 701 aaKnown RBP19.25■□□□□ 0.67
ABR-224ENST00000574048 EYSQ5T1H1 3165 aa19.24■□□□□ 0.67
ABR-224ENST00000574048 A0A1W2PQ45 241 aaPredicted RBP19.24■□□□□ 0.67
ABR-224ENST00000574048 A0A1W2PQY0 241 aa19.24■□□□□ 0.67
ABR-224ENST00000574048 KIAA0355O15063 1070 aa19.24■□□□□ 0.67
ABR-224ENST00000574048 CLTBP09497 229 aa19.24■□□□□ 0.67
ABR-224ENST00000574048 AKR1A1P14550 325 aa19.24■□□□□ 0.67
ABR-224ENST00000574048 ITGB8P26012 769 aa19.24■□□□□ 0.67
ABR-224ENST00000574048 MSL3Q8N5Y2 521 aaKnown RBP19.24■□□□□ 0.67
ABR-224ENST00000574048 CHMP4BQ9H444 224 aaKnown RBP19.24■□□□□ 0.67
ABR-224ENST00000574048 ARPP21Q9UBL0 812 aaPredicted RBP19.24■□□□□ 0.67
ABR-224ENST00000574048 SBK1Q52WX2 424 aa19.23■□□□□ 0.67
ABR-224ENST00000574048 MIER1Q8N108 512 aa19.23■□□□□ 0.67
ABR-224ENST00000574048 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
ABR-224ENST00000574048 TSEN34Q9BSV6 310 aaKnown RBP19.23■□□□□ 0.67
ABR-224ENST00000574048 TTYH1Q9H313 450 aaPredicted RBP19.23■□□□□ 0.67
ABR-224ENST00000574048 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
ABR-224ENST00000574048 RAD21O60216 631 aa19.22■□□□□ 0.67
ABR-224ENST00000574048 ADAMTS4O75173 837 aa19.22■□□□□ 0.67
ABR-224ENST00000574048 STRBPQ96SI9 672 aaKnown RBP19.22■□□□□ 0.67
ABR-224ENST00000574048 TEX13BQ9BXU2 312 aa19.22■□□□□ 0.67
ABR-224ENST00000574048 NYAP2Q9P242 653 aa19.22■□□□□ 0.67
ABR-224ENST00000574048 SYNGAP1Q96PV0 1343 aa19.22■□□□□ 0.67
ABR-224ENST00000574048 DNAJC25-GNG10A0A024R161 153 aa19.21■□□□□ 0.67
ABR-224ENST00000574048 RASA1P20936 1047 aa19.21■□□□□ 0.67
ABR-224ENST00000574048 EPHB4P54760 987 aa19.21■□□□□ 0.67
ABR-224ENST00000574048 GIMAP6Q6P9H5 292 aa19.21■□□□□ 0.67
ABR-224ENST00000574048 MAMDC4Q6UXC1 1216 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms