RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TFAP4Q01664 338 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 NUCB1Q02818 461 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 CTDSPL2Q05D32 466 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 KLRC3Q07444 240 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 MAP3K21Q5TCX8 1036 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 MFSD14CQ5VZR4 134 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 UBE2Q1Q7Z7E8 422 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 CEP95Q96GE4 821 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 CRISPLD2Q9H0B8 497 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 FLRT1Q9NZU1 646 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 MKI67P46013 3256 aaKnown RBP15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 IGKV6D-41A0A0C4DH26 115 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 H0YGN5 161 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 STRNO43815 780 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 TTLL1O95922 423 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 NDUFB10O96000 172 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 CAPN2P17655 700 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 ADORA2AP29274 412 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 NMIQ13287 307 aaPredicted RBP15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 TMEM132BQ14DG7 1078 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 MCMDC2Q4G0Z9 681 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 LRRC47Q8N1G4 583 aaKnown RBP15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 SHCBP1Q8NEM2 672 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 NPLOC4Q8TAT6 608 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 DIS3LQ8TF46 1054 aaKnown RBP15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 PAWRQ96IZ0 340 aaKnown RBP15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 MROH8Q9H579 483 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 MTMR4Q9NYA4 1195 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 PPP1R9AQ9ULJ8 1098 aa15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
NPLOC4-213ENST00000573519 TSPY2A6NKD2 308 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 VWA5AO00534 786 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 FOXP2O15409 715 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 CNGA1P29973 690 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 NECAB2Q7Z6G3 386 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 PLEKHM2Q8IWE5 1019 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 NEDD1Q8NHV4 660 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 CHMP4CQ96CF2 233 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 SLF1Q9BQI6 1058 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 INCENPQ9NQS7 918 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 TOMM22Q9NS69 142 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 CTDP1Q9Y5B0 961 aaPredicted RBP15.08■□□□□ 0
NPLOC4-213ENST00000573519 PDE4DIPQ5VU43 2346 aa15.08■□□□□ 0
NPLOC4-213ENST00000573519 RLFQ13129 1914 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 RANBP6O60518 1105 aaKnown RBP15.07■□□□□ 0
NPLOC4-213ENST00000573519 SLC25A27O95847 323 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 HOXC6P09630 235 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 FCER1AP12319 257 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 CYP2C19P33261 490 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 STAT3P40763 770 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 SLC4A3P48751 1232 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 ANKLE1Q8NAG6 615 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 KIFC2Q96AC6 838 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 SLC5A4Q9NY91 659 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 ADAMTS5Q9UNA0 930 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 STX8Q9UNK0 236 aa15.07■□□□□ 0
NPLOC4-213ENST00000573519 EVI5O60447 810 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 RRP12Q5JTH9 1297 aaKnown RBP15.06■□□□□ 0
NPLOC4-213ENST00000573519 SLFN13Q68D06 897 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
NPLOC4-213ENST00000573519 PRPF38AQ8NAV1 312 aaKnown RBP15.06■□□□□ 0
NPLOC4-213ENST00000573519 MKL1Q969V6 931 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 MMP19Q99542 508 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 OSBPL3Q9H4L5 887 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 OGDHLQ9ULD0 1010 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.06■□□□□ 0
NPLOC4-213ENST00000573519 CCDC171Q6TFL3 1326 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 PLIN4Q96Q06 1357 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 PARP14Q460N5 1801 aa15.06■□□□□ 0
NPLOC4-213ENST00000573519 COBLO75128 1261 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 ZBED4O75132 1171 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 FGAP02671 866 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 HSPD1P10809 573 aaKnown RBP15.05■□□□□ -0
NPLOC4-213ENST00000573519 SDSP20132 328 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 MFAP1P55081 439 aaKnown RBP15.05■□□□□ -0
NPLOC4-213ENST00000573519 IKQ13123 557 aaPredicted RBP15.05■□□□□ -0
NPLOC4-213ENST00000573519 KCTD2Q14681 263 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 SNRNP48Q6IEG0 339 aaKnown RBP15.05■□□□□ -0
NPLOC4-213ENST00000573519 TICAM2Q86XR7 235 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 RIOX2Q8IUF8 465 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 ABRAQ8N0Z2 381 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 CPXCR1Q8N123 301 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 GMCL1P1Q8NEA9 526 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 NBPF3Q9H094 633 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 C11orf49Q9H6J7 331 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 ANAPC4Q9UJX5 808 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 FEM1BQ9UK73 627 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 ZNF214Q9UL59 606 aaPredicted RBP15.05■□□□□ -0
NPLOC4-213ENST00000573519 MTMR7Q9Y216 660 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 NR2E3Q9Y5X4 410 aa15.05■□□□□ -0
NPLOC4-213ENST00000573519 ZNF236Q9UL36 1845 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 NMT2O60551 498 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 PGK2P07205 417 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 BMP3P12645 472 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 COPB2P35606 906 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 HAND2P61296 217 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 ALX1Q15699 326 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 PPP4R3BQ5MIZ7 849 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms