RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 NUP88Q99567 741 aaPredicted RBP20.66■□□□□ 0.9
SMG6-212ENST00000573153 INCENPQ9NQS7 918 aa20.66■□□□□ 0.9
SMG6-212ENST00000573153 OGDHLQ9ULD0 1010 aa20.66■□□□□ 0.9
SMG6-212ENST00000573153 NDUFB10O96000 172 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 FGRP09769 529 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 ZKSCAN1P17029 563 aaPredicted RBP20.65■□□□□ 0.9
SMG6-212ENST00000573153 LHX8Q68G74 356 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 MB21D1Q8N884 522 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 NEDD1Q8NHV4 660 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 MKNK2Q9HBH9 465 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 HMX1Q9NP08 348 aaPredicted RBP20.65■□□□□ 0.9
SMG6-212ENST00000573153 HELLSQ9NRZ9 838 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 MTMR4Q9NYA4 1195 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 PPP1R9AQ9ULJ8 1098 aa20.65■□□□□ 0.9
SMG6-212ENST00000573153 F5H6K3 240 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 COBLO75128 1261 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 APPP05067 770 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 NOVP48745 357 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 ATP2B2Q01814 1243 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 KLRC3Q07444 240 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 ALX1Q15699 326 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 B4GALNT3Q6L9W6 998 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 TRMT44Q8IYL2 757 aaKnown RBP20.64■□□□□ 0.89
SMG6-212ENST00000573153 TRPV1Q8NER1 839 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 NBPF3Q9H094 633 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 NAPBQ9H115 298 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 ANAPC4Q9UJX5 808 aa20.64■□□□□ 0.89
SMG6-212ENST00000573153 VWA5AO00534 786 aa20.63■□□□□ 0.89
SMG6-212ENST00000573153 CAPN2P17655 700 aa20.63■□□□□ 0.89
SMG6-212ENST00000573153 NMIQ13287 307 aaPredicted RBP20.63■□□□□ 0.89
SMG6-212ENST00000573153 ZMYM6O95789 1325 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 H0YGN5 161 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 PDE4AP27815 886 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 ADORA2AP29274 412 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 CTDSPL2Q05D32 466 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 FAM47AQ5JRC9 791 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 PAWRQ96IZ0 340 aaKnown RBP20.62■□□□□ 0.89
SMG6-212ENST00000573153 NACAP1Q9BZK3 213 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 GOPCQ9HD26 462 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 IL17RBQ9NRM6 502 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 CLIP2Q9UDT6 1046 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 SYNPO2Q9UMS6 1093 aa20.62■□□□□ 0.89
SMG6-212ENST00000573153 TFRCP02786 760 aaKnown RBP20.61■□□□□ 0.89
SMG6-212ENST00000573153 RIOX2Q8IUF8 465 aa20.61■□□□□ 0.89
SMG6-212ENST00000573153 LRRC47Q8N1G4 583 aaKnown RBP20.61■□□□□ 0.89
SMG6-212ENST00000573153 ANKLE1Q8NAG6 615 aa20.61■□□□□ 0.89
SMG6-212ENST00000573153 GMCL1P1Q8NEA9 526 aa20.61■□□□□ 0.89
SMG6-212ENST00000573153 PRO3102Q9H379 93 aa20.61■□□□□ 0.89
SMG6-212ENST00000573153 PFASO15067 1338 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
SMG6-212ENST00000573153 COL6A1P12109 1028 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 CYBAP13498 195 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 CYP2C19P33261 490 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 WDR78Q5VTH9 848 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 OLFML2BQ68BL8 750 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 RASGRP2Q7LDG7 609 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 ZNF444Q8N0Y2 327 aaPredicted RBP20.6■□□□□ 0.89
SMG6-212ENST00000573153 ABRAQ8N0Z2 381 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 CEP290O15078 2479 aa20.6■□□□□ 0.89
SMG6-212ENST00000573153 STRNO43815 780 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 ORC4O43929 436 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 NMT2O60551 498 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 TTLL1O95922 423 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 FGAP02671 866 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 TFAP4Q01664 338 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
SMG6-212ENST00000573153 IL25Q9H293 177 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 MROH8Q9H579 483 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 ZNF287Q9HBT7 754 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 RIPK3Q9Y572 518 aa20.59■□□□□ 0.89
SMG6-212ENST00000573153 RANBP2P49792 3224 aaKnown RBP20.59■□□□□ 0.89
SMG6-212ENST00000573153 CCDC171Q6TFL3 1326 aa20.58■□□□□ 0.89
SMG6-212ENST00000573153 LAMA4Q16363 1823 aa20.58■□□□□ 0.89
SMG6-212ENST00000573153 SDSP20132 328 aa20.58■□□□□ 0.89
SMG6-212ENST00000573153 PDE4BQ07343 736 aa20.58■□□□□ 0.89
SMG6-212ENST00000573153 NCAPG2Q86XI2 1143 aa20.58■□□□□ 0.89
SMG6-212ENST00000573153 SLF1Q9BQI6 1058 aa20.58■□□□□ 0.89
SMG6-212ENST00000573153 IVNS1ABPQ9Y6Y0 642 aa20.58■□□□□ 0.89
SMG6-212ENST00000573153 ZNFX1Q9P2E3 1918 aaKnown RBP20.58■□□□□ 0.88
SMG6-212ENST00000573153 ATP2A1O14983 1001 aa20.57■□□□□ 0.88
SMG6-212ENST00000573153 TSPY3P0CV98 308 aa20.57■□□□□ 0.88
SMG6-212ENST00000573153 TSPY8P0CW00 308 aa20.57■□□□□ 0.88
SMG6-212ENST00000573153 PLS1Q14651 629 aa20.57■□□□□ 0.88
SMG6-212ENST00000573153 HABP4Q5JVS0 413 aaKnown RBP20.57■□□□□ 0.88
SMG6-212ENST00000573153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMG6-212ENST00000573153 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
SMG6-212ENST00000573153 COLQQ9Y215 455 aaPredicted RBP20.57■□□□□ 0.88
SMG6-212ENST00000573153 SLC25A27O95847 323 aa20.56■□□□□ 0.88
SMG6-212ENST00000573153 GSPT1P15170 499 aaKnown RBP20.56■□□□□ 0.88
SMG6-212ENST00000573153 STAT3P40763 770 aa20.56■□□□□ 0.88
SMG6-212ENST00000573153 ZNF792Q3KQV3 632 aa20.56■□□□□ 0.88
SMG6-212ENST00000573153 SAMD1Q6SPF0 538 aaPredicted RBP20.56■□□□□ 0.88
SMG6-212ENST00000573153 TBC1D10CQ8IV04 446 aa20.56■□□□□ 0.88
SMG6-212ENST00000573153 HTATIP2Q9BUP3 242 aa20.56■□□□□ 0.88
SMG6-212ENST00000573153 SLC38A10Q9HBR0 1119 aa20.56■□□□□ 0.88
SMG6-212ENST00000573153 PLXNA1Q9UIW2 1896 aa20.56■□□□□ 0.88
SMG6-212ENST00000573153 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
SMG6-212ENST00000573153 IRX6P78412 446 aaPredicted RBP20.55■□□□□ 0.88
SMG6-212ENST00000573153 MFSD14CQ5VZR4 134 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms