RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 TADA3O75528 432 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 PDXDC2PQ6P474 469 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 NYXQ9GZU5 481 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 USP17L3A6NCW0 530 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 USP17L4A6NCW7 530 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 CASP14P31944 242 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 KIF5BP33176 963 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 USP5P45974 858 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 RAD9BQ6WBX8 426 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 NARFQ9UHQ1 456 aa12.71□□□□□ -0.37
RPAIN-212ENST00000573126 FAM182BQ5T319 152 aa12.71□□□□□ -0.38
RPAIN-212ENST00000573126 TPTE2Q6XPS3 522 aa12.71□□□□□ -0.38
RPAIN-212ENST00000573126 BLIDQ8IZY5 108 aa12.71□□□□□ -0.38
RPAIN-212ENST00000573126 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.38
RPAIN-212ENST00000573126 PANX2Q96RD6 677 aa12.71□□□□□ -0.38
RPAIN-212ENST00000573126 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.38
RPAIN-212ENST00000573126 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.38
RPAIN-212ENST00000573126 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.38
RPAIN-212ENST00000573126 GYPCP04921 128 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 CCDC175P0C221 793 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 PBX1P40424 430 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 FXR1P51114 621 aaKnown RBP eCLIP12.7□□□□□ -0.38
RPAIN-212ENST00000573126 FILIP1LQ4L180 1135 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 SH3RF3Q8TEJ3 882 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-212ENST00000573126 CCDC12Q8WUD4 166 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-212ENST00000573126 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 GPR101Q96P66 508 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-212ENST00000573126 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 VPS16Q9H269 839 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 MKNK2Q9HBH9 465 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 A0A1B0GUL6 1792 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 PP2D1A8MPX8 630 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 EFCAB8A8MWE9 144 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 MFAP3LO75121 409 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 KRT31Q15323 416 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 GRIK5Q16478 980 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 CT47A1Q5JQC4 288 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-212ENST00000573126 C12orf60Q5U649 245 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
RPAIN-212ENST00000573126 N4BP3O15049 544 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 TM4SF1P30408 202 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 RASSF8Q8NHQ8 419 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 PLIN2Q99541 437 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 STX8Q9UNK0 236 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 FHOD1Q9Y613 1164 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 ADGRG1Q9Y653 693 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 PDS5AQ29RF7 1337 aaKnown RBP12.69□□□□□ -0.38
RPAIN-212ENST00000573126 LDHBP07195 334 aaKnown RBP12.69□□□□□ -0.38
RPAIN-212ENST00000573126 CALML3P27482 149 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 PIP4K2BP78356 416 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 PPP2R3AQ06190 1150 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 PAK1Q13153 545 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 NFIXQ14938 502 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 TEX35Q5T0J7 233 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 HEATR3Q7Z4Q2 680 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 TAB2Q9NYJ8 693 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
RPAIN-212ENST00000573126 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
RPAIN-212ENST00000573126 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-212ENST00000573126 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 GTPBP6O43824 516 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 SEC31AO94979 1220 aaKnown RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 RPN1P04843 607 aaKnown RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 GOLGA8HP0CJ92 632 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 STAT6P42226 847 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 INF2Q27J81 1249 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 NELFBQ8WX92 580 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 CPVLQ9H3G5 476 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 ZSWIM4Q9H7M6 989 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 FAM53CQ9NYF3 392 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 SAP30BPQ9UHR5 308 aaKnown RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 RNF225M0QZC1 329 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 CYTH3O43739 400 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 DGKHQ86XP1 1220 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 TMEM60Q9H2L4 133 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 TRIM49BA6NDI0 452 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 PNMA6AP0CW24 399 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 LONP1P36776 959 aaKnown RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 TXLNAP40222 546 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 PRCPP42785 496 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms