RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 VCPKMTQ9H867 229 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 CTNNA3Q9UI47 895 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 IVNS1ABPQ9Y6Y0 642 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 RPTORQ8N122 1335 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 EEF2P13639 858 aaKnown RBP14.02□□□□□ -0.17
NDE1-206ENST00000572967 CCND3P30281 292 aaPredicted RBP14.02□□□□□ -0.17
NDE1-206ENST00000572967 MAP2K5Q13163 448 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 PLS1Q14651 629 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
NDE1-206ENST00000572967 MAP3K21Q5TCX8 1036 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 SIAH1Q8IUQ4 282 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 LPAR1Q92633 364 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 USP6NLQ92738 828 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 SEC62Q99442 399 aaKnown RBP14.02□□□□□ -0.17
NDE1-206ENST00000572967 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 FLRT1Q9NZU1 646 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 TMX2Q9Y320 296 aa14.02□□□□□ -0.17
NDE1-206ENST00000572967 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
NDE1-206ENST00000572967 ZNFX1Q9P2E3 1918 aaKnown RBP14.02□□□□□ -0.17
NDE1-206ENST00000572967 ZMYM6O95789 1325 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 WDR46O15213 610 aaKnown RBP14.01□□□□□ -0.17
NDE1-206ENST00000572967 APPP05067 770 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 XRCC5P13010 732 aaKnown RBP14.01□□□□□ -0.17
NDE1-206ENST00000572967 RASA1P20936 1047 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 PTPREP23469 700 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 CACNB2Q08289 660 aaPredicted RBP14.01□□□□□ -0.17
NDE1-206ENST00000572967 GRB14Q14449 540 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 COG2Q14746 738 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 RNF20Q5VTR2 975 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 TRMT44Q8IYL2 757 aaKnown RBP14.01□□□□□ -0.17
NDE1-206ENST00000572967 PAWRQ96IZ0 340 aaKnown RBP14.01□□□□□ -0.17
NDE1-206ENST00000572967 MOV10L1Q9BXT6 1211 aaKnown RBP14.01□□□□□ -0.17
NDE1-206ENST00000572967 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 COLQQ9Y215 455 aaPredicted RBP14.01□□□□□ -0.17
NDE1-206ENST00000572967 LAMA4Q16363 1823 aa14.01□□□□□ -0.17
NDE1-206ENST00000572967 SLC15A5A6NIM6 579 aa14□□□□□ -0.17
NDE1-206ENST00000572967 PRDM1O75626 825 aa14□□□□□ -0.17
NDE1-206ENST00000572967 DSG3P32926 999 aa14□□□□□ -0.17
NDE1-206ENST00000572967 SBK1Q52WX2 424 aa14□□□□□ -0.17
NDE1-206ENST00000572967 FAM83BQ5T0W9 1011 aa14□□□□□ -0.17
NDE1-206ENST00000572967 CCDC129Q6ZRS4 1044 aa14□□□□□ -0.17
NDE1-206ENST00000572967 NPLOC4Q8TAT6 608 aa14□□□□□ -0.17
NDE1-206ENST00000572967 BACH2Q9BYV9 841 aa14□□□□□ -0.17
NDE1-206ENST00000572967 NAPBQ9H115 298 aa14□□□□□ -0.17
NDE1-206ENST00000572967 KANSL2Q9H9L4 492 aa14□□□□□ -0.17
NDE1-206ENST00000572967 MKNK2Q9HBH9 465 aa14□□□□□ -0.17
NDE1-206ENST00000572967 GOPCQ9HD26 462 aa14□□□□□ -0.17
NDE1-206ENST00000572967 FBXO28Q9NVF7 368 aa14□□□□□ -0.17
NDE1-206ENST00000572967 PATL2C9JE40 543 aaKnown RBP13.99□□□□□ -0.17
NDE1-206ENST00000572967 SLC3A2P08195 630 aaKnown RBP13.99□□□□□ -0.17
NDE1-206ENST00000572967 ERCC3P19447 782 aa13.99□□□□□ -0.17
NDE1-206ENST00000572967 ADORA2AP29274 412 aa13.99□□□□□ -0.17
NDE1-206ENST00000572967 ALX1Q15699 326 aa13.99□□□□□ -0.17
NDE1-206ENST00000572967 NECAB2Q7Z6G3 386 aa13.99□□□□□ -0.17
NDE1-206ENST00000572967 ZNF589Q86UQ0 364 aaPredicted RBP13.99□□□□□ -0.17
NDE1-206ENST00000572967 NCAPG2Q86XI2 1143 aa13.99□□□□□ -0.17
NDE1-206ENST00000572967 NUP88Q99567 741 aaPredicted RBP13.99□□□□□ -0.17
NDE1-206ENST00000572967 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.99□□□□□ -0.17
NDE1-206ENST00000572967 EVI5O60447 810 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 HSPD1P10809 573 aaKnown RBP13.98□□□□□ -0.17
NDE1-206ENST00000572967 NT5C2P49902 561 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 MFSD14CQ5VZR4 134 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 C7orf61Q8IZ16 206 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 IFNL3Q8IZI9 196 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 LRRC47Q8N1G4 583 aaKnown RBP13.98□□□□□ -0.17
NDE1-206ENST00000572967 MB21D1Q8N884 522 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 ANKLE1Q8NAG6 615 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 C11orf49Q9H6J7 331 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
NDE1-206ENST00000572967 PLIN4Q96Q06 1357 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 PFASO15067 1338 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 CYP2C19P33261 490 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
NDE1-206ENST00000572967 TMEM132BQ14DG7 1078 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 IMMTQ16891 758 aaKnown RBP13.97□□□□□ -0.17
NDE1-206ENST00000572967 LSG1Q9H089 658 aaKnown RBP13.97□□□□□ -0.17
NDE1-206ENST00000572967 ZNF287Q9HBT7 754 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 HOXC10Q9NYD6 342 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 PCDH10Q9P2E7 1040 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 NR2E3Q9Y5X4 410 aa13.97□□□□□ -0.17
NDE1-206ENST00000572967 LRRC37A2A6NM11 1700 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 NDUFB10O96000 172 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 PCP11498 1178 aaKnown RBP13.96□□□□□ -0.17
NDE1-206ENST00000572967 CNGA1P29973 690 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 PPARAQ07869 468 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 KRT32Q14532 448 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 DPP9Q86TI2 863 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 SHCBP1Q8NEM2 672 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 MAP4K1Q92918 833 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 CEP95Q96GE4 821 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 NBPF3Q9H094 633 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 PPP1R9AQ9ULJ8 1098 aa13.96□□□□□ -0.17
NDE1-206ENST00000572967 LTBP2Q14767 1821 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 MCM3APO60318 1980 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 IGKV6D-41A0A0C4DH26 115 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 FOXP2O15409 715 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 HOXC6P09630 235 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 TSPY3P0CV98 308 aa13.95□□□□□ -0.18
NDE1-206ENST00000572967 TSPY8P0CW00 308 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms