RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MOGSQ13724 837 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 SLC9C2Q5TAH2 1124 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 OTOP1Q7RTM1 612 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 DNAJC2Q99543 621 aaKnown RBP9.01□□□□□ -0.97
NUP88-205ENST00000572809 ARID3AQ99856 593 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 BOLA2Q9H3K6 86 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 DCTPP1Q9H773 170 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 EFCC1Q9HA90 598 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 COL2A1P02458 1487 aaPredicted RBP9.01□□□□□ -0.97
NUP88-205ENST00000572809 FLT1P17948 1338 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 A0A0G2JLL6 359 aaPredicted RBP9□□□□□ -0.97
NUP88-205ENST00000572809 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
NUP88-205ENST00000572809 SMARCA5O60264 1052 aaPredicted RBP9□□□□□ -0.97
NUP88-205ENST00000572809 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
NUP88-205ENST00000572809 HLA-DOAP06340 250 aa9□□□□□ -0.97
NUP88-205ENST00000572809 RRP1P56182 461 aaKnown RBP9□□□□□ -0.97
NUP88-205ENST00000572809 RRP1BQ14684 758 aaKnown RBP9□□□□□ -0.97
NUP88-205ENST00000572809 KIF22Q14807 665 aa9□□□□□ -0.97
NUP88-205ENST00000572809 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
NUP88-205ENST00000572809 C17orf99Q6UX52 265 aa9□□□□□ -0.97
NUP88-205ENST00000572809 GADL1Q6ZQY3 521 aa9□□□□□ -0.97
NUP88-205ENST00000572809 PRRT2Q7Z6L0 340 aaPredicted RBP9□□□□□ -0.97
NUP88-205ENST00000572809 METTL16Q86W50 562 aaKnown RBP9□□□□□ -0.97
NUP88-205ENST00000572809 CRACR2BQ8N4Y2 399 aaPredicted RBP9□□□□□ -0.97
NUP88-205ENST00000572809 TRIM34Q9BYJ4 488 aa9□□□□□ -0.97
NUP88-205ENST00000572809 PRDM9Q9NQV7 894 aa9□□□□□ -0.97
NUP88-205ENST00000572809 PAG1Q9NWQ8 432 aa9□□□□□ -0.97
NUP88-205ENST00000572809 SAP30BPQ9UHR5 308 aaKnown RBP9□□□□□ -0.97
NUP88-205ENST00000572809 PTPN22Q9Y2R2 807 aa9□□□□□ -0.97
NUP88-205ENST00000572809 PCDHB15Q9Y5E8 787 aa9□□□□□ -0.97
NUP88-205ENST00000572809 ZNF532Q9HCE3 1301 aa9□□□□□ -0.97
NUP88-205ENST00000572809 MYO5AQ9Y4I1 1855 aaKnown RBP9□□□□□ -0.97
NUP88-205ENST00000572809 DOCK2Q92608 1830 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 TRIM75PA6NK02 468 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 USP17L5A8MUK1 530 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 PDE6AP16499 860 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 CAP1Q01518 475 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 MLLT1Q03111 559 aaPredicted RBP8.99□□□□□ -0.97
NUP88-205ENST00000572809 FUT2Q10981 343 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 SPP2Q13103 211 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 SLC4A8Q2Y0W8 1093 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 TTC6Q86TZ1 520 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 CCDC84Q86UT8 332 aaPredicted RBP8.99□□□□□ -0.97
NUP88-205ENST00000572809 ZNF280CQ8ND82 737 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 SNIP1Q8TAD8 396 aaKnown RBP8.99□□□□□ -0.97
NUP88-205ENST00000572809 EDC3Q96F86 508 aaKnown RBP8.99□□□□□ -0.97
NUP88-205ENST00000572809 TRIM47Q96LD4 638 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 HAUS7Q99871 368 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 RIOK1Q9BRS2 568 aaKnown RBP8.99□□□□□ -0.97
NUP88-205ENST00000572809 AS3MTQ9HBK9 375 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.99□□□□□ -0.97
NUP88-205ENST00000572809 CPA4Q9UI42 421 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 SLC27A5Q9Y2P5 690 aa8.99□□□□□ -0.97
NUP88-205ENST00000572809 TCRBV5S4A2TA0A5A2 114 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 WNT7AO00755 349 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 HOXA2O43364 376 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 AP1G2O75843 785 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 GNRH1P01148 92 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 ASNSP08243 561 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 FDX1P10109 184 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 CYP2C8P10632 490 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 SOX10P56693 466 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 LACTBP83111 547 aaPredicted RBP8.98□□□□□ -0.97
NUP88-205ENST00000572809 QPCTQ16769 361 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 PARK7Q99497 189 aaKnown RBP8.98□□□□□ -0.97
NUP88-205ENST00000572809 CRNKL1Q9BZJ0 848 aaKnown RBP8.98□□□□□ -0.97
NUP88-205ENST00000572809 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.98□□□□□ -0.97
NUP88-205ENST00000572809 SENP2Q9HC62 589 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 GINM1Q9NU53 330 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 SLC45A1Q9Y2W3 748 aa8.98□□□□□ -0.97
NUP88-205ENST00000572809 J3QL48 77 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 POLR3DP05423 398 aaPredicted RBP8.97□□□□□ -0.97
NUP88-205ENST00000572809 HOXD10P28358 340 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 ADD2P35612 726 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 JAG1P78504 1218 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 ZSCAN25Q6NSZ9 544 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 TATDN1Q6P1N9 297 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 CRBNQ96SW2 442 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 WDR18Q9BV38 432 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 ARHGAP39Q9C0H5 1083 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 DNAJC18Q9H819 358 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 ECHDC1Q9NTX5 307 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 SERPINB13Q9UIV8 391 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 AGTPBP1Q9UPW5 1226 aa8.97□□□□□ -0.97
NUP88-205ENST00000572809 MAST2Q6P0Q8 1798 aa8.96□□□□□ -0.97
NUP88-205ENST00000572809 C19orf81C9J6K1 198 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 GDF11O95390 407 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 BCRP11274 1271 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 PSMC4P43686 418 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 PLCD1P51178 756 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 HMGCS2P54868 508 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 PRMT2P55345 433 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 BACE1P56817 501 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 PABPC4Q13310 644 aaKnown RBP eCLIP8.96□□□□□ -0.98
NUP88-205ENST00000572809 UBE3CQ15386 1083 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 SLFNL1Q499Z3 407 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.98
NUP88-205ENST00000572809 TREML2Q5T2D2 321 aa8.96□□□□□ -0.98
NUP88-205ENST00000572809 NBPF11Q86T75 865 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms