RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 NBPF3Q9H094 633 aa19.16■□□□□ 0.66
NDE1-205ENST00000572756 SPATC1LQ9H0A9 340 aa19.16■□□□□ 0.66
NDE1-205ENST00000572756 FBXO28Q9NVF7 368 aa19.16■□□□□ 0.66
NDE1-205ENST00000572756 BIN2Q9UBW5 565 aaPredicted RBP19.16■□□□□ 0.66
NDE1-205ENST00000572756 CCAR1Q8IX12 1150 aaKnown RBP19.15■□□□□ 0.66
NDE1-205ENST00000572756 MOV10L1Q9BXT6 1211 aaKnown RBP19.15■□□□□ 0.66
NDE1-205ENST00000572756 UNC93B1Q9H1C4 597 aa19.15■□□□□ 0.66
NDE1-205ENST00000572756 PPP1R9AQ9ULJ8 1098 aa19.15■□□□□ 0.66
NDE1-205ENST00000572756 HMGCRP04035 888 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 GJB1P08034 283 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 CYP2B6P20813 491 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 NOVP48745 357 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 SHCBP1Q8NEM2 672 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 TRIB2Q92519 343 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 SHISA4Q96DD7 197 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 NUP88Q99567 741 aaPredicted RBP19.14■□□□□ 0.65
NDE1-205ENST00000572756 RNF208Q9H0X6 261 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 IL25Q9H293 177 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 IL17RBQ9NRM6 502 aa19.14■□□□□ 0.65
NDE1-205ENST00000572756 ZNFX1Q9P2E3 1918 aaKnown RBP19.13■□□□□ 0.65
NDE1-205ENST00000572756 SLC15A5A6NIM6 579 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 TSPY2A6NKD2 308 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 RAD21O60216 631 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 PTPREP23469 700 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 HAND2P61296 217 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 GRB14Q14449 540 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 TMEM132BQ14DG7 1078 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 LRRC47Q8N1G4 583 aaKnown RBP19.13■□□□□ 0.65
NDE1-205ENST00000572756 REPS2Q8NFH8 660 aa19.13■□□□□ 0.65
NDE1-205ENST00000572756 VWA5AO00534 786 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 RANBP6O60518 1105 aaKnown RBP19.12■□□□□ 0.65
NDE1-205ENST00000572756 NMT2O60551 498 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 RGS2P41220 211 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 GJA8P48165 433 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 TRIM32Q13049 653 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 MAP2K5Q13163 448 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 PPP4R3BQ5MIZ7 849 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 TBC1D10CQ8IV04 446 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 STAG1Q8WVM7 1258 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 APBA2Q99767 749 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 DSCC1Q9BVC3 393 aa19.12■□□□□ 0.65
NDE1-205ENST00000572756 PAK6Q9NQU5 681 aaPredicted RBP19.12■□□□□ 0.65
NDE1-205ENST00000572756 HOXC6P09630 235 aa19.11■□□□□ 0.65
NDE1-205ENST00000572756 PCP11498 1178 aaKnown RBP19.11■□□□□ 0.65
NDE1-205ENST00000572756 ERCC3P19447 782 aa19.11■□□□□ 0.65
NDE1-205ENST00000572756 AKNAD1Q5T1N1 836 aa19.11■□□□□ 0.65
NDE1-205ENST00000572756 MAP3K21Q5TCX8 1036 aa19.11■□□□□ 0.65
NDE1-205ENST00000572756 WDR78Q5VTH9 848 aa19.11■□□□□ 0.65
NDE1-205ENST00000572756 TRMT44Q8IYL2 757 aaKnown RBP19.11■□□□□ 0.65
NDE1-205ENST00000572756 NKX2-3Q8TAU0 364 aa19.11■□□□□ 0.65
NDE1-205ENST00000572756 SLF1Q9BQI6 1058 aa19.11■□□□□ 0.65
NDE1-205ENST00000572756 CWC22Q9HCG8 908 aaKnown RBP19.11■□□□□ 0.65
NDE1-205ENST00000572756 ZNF214Q9UL59 606 aaPredicted RBP19.11■□□□□ 0.65
NDE1-205ENST00000572756 RAD50Q92878 1312 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 CHMLP26374 656 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 CCL14Q16627 93 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 SLFN13Q68D06 897 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
NDE1-205ENST00000572756 GMCL1Q96IK5 515 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 MROH8Q9H579 483 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 TCP11L1Q9NUJ3 509 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 IVNS1ABPQ9Y6Y0 642 aa19.1■□□□□ 0.65
NDE1-205ENST00000572756 STRNO43815 780 aa19.09■□□□□ 0.65
NDE1-205ENST00000572756 SLC25A27O95847 323 aa19.09■□□□□ 0.65
NDE1-205ENST00000572756 IGHA2P01877 340 aa19.09■□□□□ 0.65
NDE1-205ENST00000572756 ZKSCAN1P17029 563 aaPredicted RBP19.09■□□□□ 0.65
NDE1-205ENST00000572756 PLS1Q14651 629 aa19.09■□□□□ 0.65
NDE1-205ENST00000572756 RRP12Q5JTH9 1297 aaKnown RBP19.09■□□□□ 0.65
NDE1-205ENST00000572756 CENPQQ7L2Z9 268 aaPredicted RBP19.09■□□□□ 0.65
NDE1-205ENST00000572756 RIOX2Q8IUF8 465 aa19.09■□□□□ 0.65
NDE1-205ENST00000572756 PRPF38AQ8NAV1 312 aaKnown RBP19.09■□□□□ 0.65
NDE1-205ENST00000572756 U2AF1L4Q8WU68 220 aaKnown RBP19.09■□□□□ 0.65
NDE1-205ENST00000572756 FEM1BQ9UK73 627 aa19.09■□□□□ 0.65
NDE1-205ENST00000572756 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
NDE1-205ENST00000572756 NEDD4P46934 1319 aa19.08■□□□□ 0.65
NDE1-205ENST00000572756 RPTORQ8N122 1335 aa19.08■□□□□ 0.65
NDE1-205ENST00000572756 ZNF213O14771 459 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 SGPL1O95470 568 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 BMP3P12645 472 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 ADORA2AP29274 412 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 MFSD6Q6ZSS7 791 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 UBE2Q1Q7Z7E8 422 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 ABRAQ8N0Z2 381 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 NPLOC4Q8TAT6 608 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.08■□□□□ 0.64
NDE1-205ENST00000572756 RNF41Q9H4P4 317 aaPredicted RBP19.08■□□□□ 0.64
NDE1-205ENST00000572756 TOMM22Q9NS69 142 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 FLRT1Q9NZU1 646 aa19.08■□□□□ 0.64
NDE1-205ENST00000572756 ATP2A1O14983 1001 aa19.07■□□□□ 0.64
NDE1-205ENST00000572756 PRKAR2AP13861 404 aaKnown RBP19.07■□□□□ 0.64
NDE1-205ENST00000572756 STAT3P40763 770 aa19.07■□□□□ 0.64
NDE1-205ENST00000572756 NCAPG2Q86XI2 1143 aa19.07■□□□□ 0.64
NDE1-205ENST00000572756 DEFB118Q96PH6 123 aa19.07■□□□□ 0.64
NDE1-205ENST00000572756 CRISPLD2Q9H0B8 497 aa19.07■□□□□ 0.64
NDE1-205ENST00000572756 HMX1Q9NP08 348 aaPredicted RBP19.07■□□□□ 0.64
NDE1-205ENST00000572756 PLXNA1Q9UIW2 1896 aa19.07■□□□□ 0.64
NDE1-205ENST00000572756 PLA2G6O60733 806 aa19.06■□□□□ 0.64
NDE1-205ENST00000572756 CAPN2P17655 700 aa19.06■□□□□ 0.64
NDE1-205ENST00000572756 NT5C2P49902 561 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms