RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 USP17L12C9JPN9 530 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 USP17L21D6R901 530 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 SMIM22K7EJ46 135 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 EEF2P13639 858 aaKnown RBP11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 UBE3CQ15386 1083 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 C9orf50Q5SZB4 431 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 RIOX2Q8IUF8 465 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 DDRGK1Q96HY6 314 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 MMP19Q99542 508 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 HAUS7Q99871 368 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 BCL11AQ9H165 835 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 PDLIM7Q9NR12 457 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 PHF24Q9UPV7 400 aa11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 DIS3Q9Y2L1 958 aaKnown RBP11.88□□□□□ -0.51
TRAPPC1-205ENST00000572656 TRIM43BA6NCK2 446 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 VWA5AO00534 786 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 PGK2P07205 417 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 RARBP10826 455 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 COPB2P35606 906 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 STAT3P40763 770 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 TLE2Q04725 743 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 KCTD2Q14681 263 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZNF792Q3KQV3 632 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 TRIM43Q96BQ3 446 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 XPNPEP3Q9NQH7 507 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 DDX19BQ9UMR2 479 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 SLC4A4Q9Y6R1 1079 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 DNAH12Q6ZR08 3092 aa11.87□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 CHGBP05060 677 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZSCAN25Q6NSZ9 544 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 CTR9Q6PD62 1173 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 RNF180Q86T96 592 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 CDX2Q99626 313 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 COL25A1Q9BXS0 654 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 SEMA6BQ9H3T3 888 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 CHMP4BQ9H444 224 aaKnown RBP11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 A0A0G2JMZ2 1700 aa11.86□□□□□ -0.51
TRAPPC1-205ENST00000572656 NAV1Q8NEY1 1877 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 ROBO3Q96MS0 1386 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 RAD21O60216 631 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 PGK1P00558 417 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 CLTBP09497 229 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 ZNF865P0CJ78 1059 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 AKR1A1P14550 325 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 TAL1P17542 331 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 REPS2Q8NFH8 660 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 PUS7LQ9H0K6 701 aaKnown RBP11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 COG6Q9Y2V7 657 aa11.85□□□□□ -0.51
TRAPPC1-205ENST00000572656 FRMPD3Q5JV73 1810 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 A0A1W2PQ45 241 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 A0A1W2PQY0 241 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 KIAA0355O15063 1070 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 ITGB8P26012 769 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 MIER1Q8N108 512 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 MSL3Q8N5Y2 521 aaKnown RBP11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 TSEN34Q9BSV6 310 aaKnown RBP11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 CUL9Q8IWT3 2517 aa11.84□□□□□ -0.51
TRAPPC1-205ENST00000572656 PQBP1O60828 265 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 ADAMTS4O75173 837 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 SBK1Q52WX2 424 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 ANKRD33Q7Z3H0 272 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 MAFAQ8NHW3 353 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 TOX2Q96NM4 488 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 STRBPQ96SI9 672 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 TEX13BQ9BXU2 312 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 LRRCC1Q9C099 1032 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 TTYH1Q9H313 450 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 RLFQ13129 1914 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 SYNGAP1Q96PV0 1343 aa11.83□□□□□ -0.52
TRAPPC1-205ENST00000572656 F5H6K3 240 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 RAG1P15918 1043 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 RASA1P20936 1047 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 ACLYP53396 1101 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 EPHB4P54760 987 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 KLRC3Q07444 240 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 SNRNP48Q6IEG0 339 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 GIMAP6Q6P9H5 292 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 MAMDC4Q6UXC1 1216 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 KLHDC9Q8NEP7 349 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 NUP133Q8WUM0 1156 aa11.82□□□□□ -0.52
TRAPPC1-205ENST00000572656 LENG1Q96BZ8 264 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms