RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 GUCY1A2P33402 732 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 COPB2P35606 906 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 CDK7P50613 346 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 ACLYP53396 1101 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 RAB3GAP1Q15042 981 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 C16orf59Q7L2K0 433 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 TMEM199Q8N511 208 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 KLHDC9Q8NEP7 349 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 HERVK_113Q902F9 699 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 LRFN3Q9BTN0 628 aa12.38□□□□□ -0.43
CHMP6-203ENST00000572525 API5Q9BZZ5 524 aaKnown RBP12.38□□□□□ -0.43
CHMP6-203ENST00000572525 ERC2O15083 957 aa12.37□□□□□ -0.43
CHMP6-203ENST00000572525 PGK1P00558 417 aa12.37□□□□□ -0.43
CHMP6-203ENST00000572525 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-203ENST00000572525 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-203ENST00000572525 SHMT1P34896 483 aa12.37□□□□□ -0.43
CHMP6-203ENST00000572525 PBX2P40425 430 aa12.37□□□□□ -0.43
CHMP6-203ENST00000572525 PRAMEF19Q5SWL8 479 aa12.37□□□□□ -0.43
CHMP6-203ENST00000572525 CCSAPQ6IQ19 270 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-203ENST00000572525 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
CHMP6-203ENST00000572525 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
CHMP6-203ENST00000572525 SAP30BPQ9UHR5 308 aaKnown RBP12.37□□□□□ -0.43
CHMP6-203ENST00000572525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-203ENST00000572525 BAZ2AQ9UIF9 1905 aaKnown RBP12.37□□□□□ -0.43
CHMP6-203ENST00000572525 GPR37L1O60883 481 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 CYP2E1P05181 493 aaPredicted RBP12.36□□□□□ -0.43
CHMP6-203ENST00000572525 GABPAQ06546 454 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 CCDC158Q5M9N0 1113 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 NCAPG2Q86XI2 1143 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
CHMP6-203ENST00000572525 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 MEIS3Q99687 375 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 IL23AQ9NPF7 189 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 ADAMTS5Q9UNA0 930 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 SYNRGQ9UMZ2 1314 aa12.36□□□□□ -0.43
CHMP6-203ENST00000572525 GREB1LQ9C091 1923 aaPredicted RBP12.35□□□□□ -0.43
CHMP6-203ENST00000572525 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 DUSP11O75319 330 aaKnown RBP12.35□□□□□ -0.43
CHMP6-203ENST00000572525 RIOX2Q8IUF8 465 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 SEZ6LQ9BYH1 1024 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 TANGO6Q9C0B7 1094 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 SH2D4AQ9H788 454 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 COG5Q9UP83 839 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 MYH7P12883 1935 aa12.35□□□□□ -0.43
CHMP6-203ENST00000572525 WDFY4Q6ZS81 3184 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 TRIOO75962 3097 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 ZNF318Q5VUA4 2279 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 A0A0U1RQG5 324 aaPredicted RBP12.34□□□□□ -0.43
CHMP6-203ENST00000572525 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 ARVCFO00192 962 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 WDR46O15213 610 aaKnown RBP12.34□□□□□ -0.43
CHMP6-203ENST00000572525 TLR3O15455 904 aaKnown RBP12.34□□□□□ -0.43
CHMP6-203ENST00000572525 CSF2RAP15509 400 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 IGFBP4P22692 258 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 USP5P45974 858 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 NKX3-2P78367 333 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
CHMP6-203ENST00000572525 SEPT2Q15019 361 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 TTC39AQ5SRH9 613 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 MAMDC4Q6UXC1 1216 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 ZNF365Q70YC5 407 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 FAM126BQ8IXS8 530 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 TANC1Q9C0D5 1861 aa12.34□□□□□ -0.43
CHMP6-203ENST00000572525 MYH4Q9Y623 1939 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 CYP7A1P22680 504 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 DYNLL1P63167 89 aaKnown RBP12.33□□□□□ -0.44
CHMP6-203ENST00000572525 PLS1Q14651 629 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 KCTD2Q14681 263 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 CCDC85BQ15834 202 aaPredicted RBP12.33□□□□□ -0.44
CHMP6-203ENST00000572525 KCNA10Q16322 511 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 TMEM179Q6ZVK1 233 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHMP6-203ENST00000572525 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
CHMP6-203ENST00000572525 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 MMP19Q99542 508 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 UPF3AQ9H1J1 476 aaKnown RBP12.33□□□□□ -0.44
CHMP6-203ENST00000572525 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 PCDHA11Q9Y5I1 949 aa12.33□□□□□ -0.44
CHMP6-203ENST00000572525 FLOT1O75955 427 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 CD4P01730 458 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 FGBP02675 491 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
CHMP6-203ENST00000572525 PLCD1P51178 756 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 SLFN5Q08AF3 891 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 TMEM132BQ14DG7 1078 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 TNNI3KQ59H18 835 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 MAGEB6Q8N7X4 407 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 NECAB3Q96P71 396 aaPredicted RBP12.32□□□□□ -0.44
CHMP6-203ENST00000572525 NKX2-4Q9H2Z4 354 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 EPHX3Q9H6B9 360 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 SPC25Q9HBM1 224 aa12.32□□□□□ -0.44
CHMP6-203ENST00000572525 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms