RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CPLX1O14810 134 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZBTB43O43298 467 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 NMT2O60551 498 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CELF2O95319 508 aaKnown RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CALM1P0DP23 149 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CALM2P0DP24 149 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CALM3P0DP25 149 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 SLURP2P0DP57 97 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 TOP1P11387 765 aaKnown RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 KIF5BP33176 963 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 LIFRP42702 1097 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 METAP2P50579 478 aaKnown RBP eCLIP7.69□□□□□ -1.184e-6■□□□□ 8.6
CTDNEP1-204ENST00000570484 FKBP1BP68106 108 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 EXOSC10Q01780 885 aaKnown RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 APOBRQ0VD83 1088 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 SEPT2Q15019 361 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CCDC96Q2M329 555 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CPLX2Q6PUV4 134 aaKnown RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 DGKHQ86XP1 1220 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CLEC10AQ8IUN9 316 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 ANKRD13AQ8IZ07 590 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZNF654Q8IZM8 581 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 LRRC47Q8N1G4 583 aaKnown RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 C2orf69Q8N8R5 385 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 PNMA1Q8ND90 353 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 CTCFLQ8NI51 663 aaPredicted RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 NUP133Q8WUM0 1156 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 SNX21Q969T3 373 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZSCAN31Q96LW9 406 aaPredicted RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 TTC14Q96N46 770 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 ALDH8A1Q9H2A2 487 aaPredicted RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 SLKQ9H2G2 1235 aaPredicted RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 LY9Q9HBG7 655 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 GBA2Q9HCG7 927 aaPredicted RBP7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 GOPCQ9HD26 462 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 MTMR4Q9NYA4 1195 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 TACC3Q9Y6A5 838 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 MYH1P12882 1939 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 BAZ2AQ9UIF9 1905 aaKnown RBP7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 CCDC196A0A1B0GTZ2 297 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 USP17L5A8MUK1 530 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 DHX16O60231 1041 aaKnown RBP7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 CDKL5O76039 1030 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 INPP5BP32019 993 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 RCAN1P53805 252 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 MAP3K10Q02779 954 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 STK3Q13188 491 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 TOB2Q14106 344 aaPredicted RBP7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 VGLL4Q14135 290 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 NOL9Q5SY16 702 aaKnown RBP7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 APOA5Q6Q788 366 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 SGMS1Q86VZ5 419 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 RBM46Q8TBY0 533 aaKnown RBP7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 KLRG1Q96E93 195 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZBED2Q9BTP6 218 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 NYAP2Q9P242 653 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 CLIP2Q9UDT6 1046 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 SYNPO2Q9UMS6 1093 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 FZD1Q9UP38 647 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 PAPPA2Q9BXP8 1791 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 SIPA1L1O43166 1804 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 UTRNP46939 3433 aa7.68□□□□□ -1.18
CTDNEP1-204ENST00000570484 IGKV6D-41A0A0C4DH26 115 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 TRIM75PA6NK02 468 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 PHF20L1A8MW92 1017 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 TRIM66O15016 1216 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 TOMM70O94826 608 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 EEF2P13639 858 aaKnown RBP7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 USP14P54578 494 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 IKQ13123 557 aaPredicted RBP7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 SEC23AQ15436 765 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 RTN1Q16799 776 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 DLK2Q6UY11 383 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 RAB11FIP4Q86YS3 637 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 FBXL16Q8N461 479 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZNF784Q8NCA9 323 aaPredicted RBP7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 IGDCC4Q8TDY8 1250 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZKSCAN4Q969J2 545 aaPredicted RBP7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZNF274Q96GC6 653 aaPredicted RBP7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 TMX3Q96JJ7 454 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 TMEM47Q9BQJ4 181 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 MYL10Q9BUA6 226 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 AGXT2Q9BYV1 514 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 ELP3Q9H9T3 547 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 IL17RBQ9NRM6 502 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 RBM28Q9NW13 759 aaKnown RBP7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 TMOD4Q9NZQ9 345 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZNF112Q9UJU3 913 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 TPCN1Q9ULQ1 816 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 KIF3AQ9Y496 699 aa7.67□□□□□ -1.18
CTDNEP1-204ENST00000570484 UNCXA6NJT0 531 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 USP17L10C9JJH3 530 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 USP2O75604 605 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 CD2BP2O95400 341 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 PARP1P09874 1014 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 PTPRAP18433 802 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms