RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 ADAMTS12P58397 1594 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 ZBBXA8MT70 800 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 FAM25EA8MYX2 175 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 BIN1O00499 593 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 CAPN5O15484 640 aaPredicted RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 CYP27B1O15528 508 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 CYTH3O43739 400 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 MBD4O95243 580 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 U2AF1L5P0DN76 240 aaPredicted RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 IRAK1P51617 712 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 CSE1LP55060 971 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 MRPS25P82663 173 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 CCZ1BP86790 482 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 CCZ1P86791 482 aaPredicted RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 U2AF1Q01081 240 aaKnown RBP eCLIP7.25□□□□□ -1.25
KARS-211ENST00000569298 PTK7Q13308 1070 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 EIF4A2Q14240 407 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 MAP7Q14244 749 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 LARP1BQ659C4 914 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 NAA16Q6N069 864 aaPredicted RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 CCDC70Q6NSX1 233 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 RBM43Q6ZSC3 357 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 SH3RF1Q7Z6J0 888 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 UBE2Q1Q7Z7E8 422 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 DRC7Q8IY82 874 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 MYO1HQ8N1T3 1032 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 ARHGAP18Q8N392 663 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 SMC1BQ8NDV3 1235 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 CFAP61Q8NHU2 1237 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 WHAMMQ8TF30 809 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 OPTNQ96CV9 577 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 TBC1D31Q96DN5 1066 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 TRIM47Q96LD4 638 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 JAKMIP1Q96N16 626 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 TRAPPC9Q96Q05 1148 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 EIF2AQ9BY44 585 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 GOLPH3LQ9H4A5 285 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 PDE11AQ9HCR9 933 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 DMAP1Q9NPF5 467 aaPredicted RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 DDX21Q9NR30 783 aaKnown RBP eCLIP7.25□□□□□ -1.25
KARS-211ENST00000569298 IL20Q9NYY1 176 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
KARS-211ENST00000569298 TFIP11Q9UBB9 837 aaKnown RBP7.25□□□□□ -1.25
KARS-211ENST00000569298 TEX14Q8IWB6 1497 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 PTPN23Q9H3S7 1636 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 TBKBP1A7MCY6 615 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 EIF3HO15372 352 aaKnown RBP eCLIP7.24□□□□□ -1.25
KARS-211ENST00000569298 DNAJC8O75937 253 aaPredicted RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 PRPF6O94906 941 aaKnown RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 SEC31AO94979 1220 aaKnown RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 ADH1CP00326 375 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 CSB-PGBD3P0DP91 1061 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 ALDH3A1P30838 453 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 GNAQP50148 359 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 MRPS35P82673 323 aaKnown RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 AKAP17AQ02040 695 aaKnown RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 SULT2A1Q06520 285 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 KCNA1Q09470 495 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 LRMPQ12912 555 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 NNTQ13423 1086 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 XRCC4Q13426 336 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 SEPT7Q16181 437 aaKnown RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 CCDC14Q49A88 953 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 BOLA3Q53S33 107 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 SPDYCQ5MJ68 293 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 CCDC122Q5T0U0 273 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 ARMC3Q5W041 872 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 THOC7Q6I9Y2 204 aaKnown RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 OLFML1Q6UWY5 402 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 ARHGEF25Q86VW2 580 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 TTC39CQ8N584 583 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.24□□□□□ -1.25
KARS-211ENST00000569298 WDR66Q8TBY9 1149 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 TAF4BQ92750 862 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 GPKOWQ92917 476 aaPredicted RBP eCLIP7.24□□□□□ -1.25
KARS-211ENST00000569298 SMARCC1Q92922 1105 aaPredicted RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 KIFC2Q96AC6 838 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 ZNF653Q96CK0 615 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 GCC1Q96CN9 775 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 CCDC28BQ9BUN5 200 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 TRIM5Q9C035 493 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 BICC1Q9H694 974 aaKnown RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 RPAP3Q9H6T3 665 aaPredicted RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 TMEM165Q9HC07 324 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 SLC40A1Q9NP59 571 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 ZFATQ9P243 1243 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 RABL2AQ9UBK7 228 aaPredicted RBP7.24□□□□□ -1.25
KARS-211ENST00000569298 PNMA2Q9UL42 364 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 C15orf41Q9Y2V0 281 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 N6AMT1Q9Y5N5 214 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 IKBKGQ9Y6K9 419 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 NPATQ14207 1427 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 UHRF1BP1Q6BDS2 1440 aa7.24□□□□□ -1.25
KARS-211ENST00000569298 MSH6P52701 1360 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 USP47Q96K76 1375 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 LRRD1A4D1F6 860 aa7.23□□□□□ -1.25
KARS-211ENST00000569298 LRRIQ3A6PVS8 624 aaPredicted RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 EIF3FO00303 357 aaPredicted RBP7.23□□□□□ -1.25
KARS-211ENST00000569298 SMARCA5O60264 1052 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms