RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ISY1Q9ULR0 285 aaKnown RBP17.13■□□□□ 0.33
COMMD4-225ENST00000569245 NDUFB10O96000 172 aa17.12■□□□□ 0.33
COMMD4-225ENST00000569245 HMGCRP04035 888 aa17.12■□□□□ 0.33
COMMD4-225ENST00000569245 GJB1P08034 283 aa17.12■□□□□ 0.33
COMMD4-225ENST00000569245 HAND2P61296 217 aa17.12■□□□□ 0.33
COMMD4-225ENST00000569245 RRP12Q5JTH9 1297 aaKnown RBP17.12■□□□□ 0.33
COMMD4-225ENST00000569245 LRRC47Q8N1G4 583 aaKnown RBP17.12■□□□□ 0.33
COMMD4-225ENST00000569245 MOV10L1Q9BXT6 1211 aaKnown RBP17.12■□□□□ 0.33
COMMD4-225ENST00000569245 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
COMMD4-225ENST00000569245 TNRC18O15417 2968 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-225ENST00000569245 MGAMO43451 1857 aa17.12■□□□□ 0.33
COMMD4-225ENST00000569245 MYH8P13535 1937 aa17.11■□□□□ 0.33
COMMD4-225ENST00000569245 XRCC5P13010 732 aaKnown RBP17.11■□□□□ 0.33
COMMD4-225ENST00000569245 ZKSCAN1P17029 563 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-225ENST00000569245 PTPREP23469 700 aa17.11■□□□□ 0.33
COMMD4-225ENST00000569245 PPP4R3BQ5MIZ7 849 aa17.11■□□□□ 0.33
COMMD4-225ENST00000569245 MORN1Q5T089 497 aa17.11■□□□□ 0.33
COMMD4-225ENST00000569245 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
COMMD4-225ENST00000569245 MKL1Q969V6 931 aa17.11■□□□□ 0.33
COMMD4-225ENST00000569245 STX8Q9UNK0 236 aa17.11■□□□□ 0.33
COMMD4-225ENST00000569245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
COMMD4-225ENST00000569245 SLC15A5A6NIM6 579 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
COMMD4-225ENST00000569245 ERCC3P19447 782 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 GJA8P48165 433 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 MAP2K5Q13163 448 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 SLFN13Q68D06 897 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 TRMT44Q8IYL2 757 aaKnown RBP17.1■□□□□ 0.33
COMMD4-225ENST00000569245 TRIB2Q92519 343 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 CHMP4CQ96CF2 233 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 DEFB118Q96PH6 123 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
COMMD4-225ENST00000569245 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-225ENST00000569245 KIAA0100Q14667 2235 aaKnown RBP17.1■□□□□ 0.33
COMMD4-225ENST00000569245 MKI67P46013 3256 aaKnown RBP17.1■□□□□ 0.33
COMMD4-225ENST00000569245 VWA5AO00534 786 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 ZNF213O14771 459 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 ORC4O43929 436 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 NMT2O60551 498 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 TRIM32Q13049 653 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 MFSD6Q6ZSS7 791 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 DPP9Q86TI2 863 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
COMMD4-225ENST00000569245 USP6NLQ92738 828 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 APBA2Q99767 749 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 MROH8Q9H579 483 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 HMX1Q9NP08 348 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-225ENST00000569245 SYNPO2Q9UMS6 1093 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 PLIN4Q96Q06 1357 aa17.09■□□□□ 0.33
COMMD4-225ENST00000569245 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 RPTORQ8N122 1335 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 STRNO43815 780 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 SGPL1O95470 568 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 PRKAR2AP13861 404 aaKnown RBP17.08■□□□□ 0.32
COMMD4-225ENST00000569245 CHMLP26374 656 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 GRB14Q14449 540 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 CCL14Q16627 93 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 PRPF38AQ8NAV1 312 aaKnown RBP17.08■□□□□ 0.32
COMMD4-225ENST00000569245 GMCL1P1Q8NEA9 526 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 SHCBP1Q8NEM2 672 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 KIFC2Q96AC6 838 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
COMMD4-225ENST00000569245 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-225ENST00000569245 ADAMTS5Q9UNA0 930 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 TACC3Q9Y6A5 838 aa17.08■□□□□ 0.32
COMMD4-225ENST00000569245 EIF5BO60841 1220 aaKnown RBP17.07■□□□□ 0.32
COMMD4-225ENST00000569245 ZBED4O75132 1171 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 SLC25A27O95847 323 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 BMP3P12645 472 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 STAT3P40763 770 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 IKQ13123 557 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-225ENST00000569245 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 IL17RBQ9NRM6 502 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 FEM1BQ9UK73 627 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 MTMR7Q9Y216 660 aa17.07■□□□□ 0.32
COMMD4-225ENST00000569245 FGRP09769 529 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 PCP11498 1178 aaKnown RBP17.06■□□□□ 0.32
COMMD4-225ENST00000569245 FCER1AP12319 257 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 MCCP23508 829 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 ADORA2AP29274 412 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 SLC1A4P43007 532 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 MFSD14CQ5VZR4 134 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 SHISA4Q96DD7 197 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-225ENST00000569245 SLC5A4Q9NY91 659 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
COMMD4-225ENST00000569245 DOCK3Q8IZD9 2030 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 TMEM232C9JQI7 657 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 CACNB2Q08289 660 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-225ENST00000569245 IMMTQ16891 758 aaKnown RBP17.05■□□□□ 0.32
COMMD4-225ENST00000569245 RIOX2Q8IUF8 465 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 STAG1Q8WVM7 1258 aa17.05■□□□□ 0.32
COMMD4-225ENST00000569245 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms