RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	NDUFB10	O96000	172 aa		28.85	■■■□□ 2.21
GGA2-215	ENST00000569189	CYP2B6	P20813	491 aa		28.85	■■■□□ 2.21
GGA2-215	ENST00000569189	KLRC3	Q07444	240 aa		28.85	■■■□□ 2.21
GGA2-215	ENST00000569189	MORN1	Q5T089	497 aa		28.85	■■■□□ 2.21
GGA2-215	ENST00000569189	HMGCR	P04035	888 aa		28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	LRRC47	Q8N1G4	583 aa	Known RBP	28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	USP6NL	Q92738	828 aa		28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	NUP88	Q99567	741 aa	Predicted RBP	28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	MOV10L1	Q9BXT6	1211 aa	Known RBP	28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	SPATC1L	Q9H0A9	340 aa		28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	UNC93B1	Q9H1C4	597 aa		28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	FBXO28	Q9NVF7	368 aa		28.84	■■■□□ 2.21
GGA2-215	ENST00000569189	ZNF236	Q9UL36	1845 aa		28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	RANBP6	O60518	1105 aa	Known RBP	28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	FGR	P09769	529 aa		28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	XRCC5	P13010	732 aa	Known RBP	28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	RGS2	P41220	211 aa		28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	PPP4R3B	Q5MIZ7	849 aa		28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	PPP1R9A	Q9ULJ8	1098 aa		28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	ADAMTS5	Q9UNA0	930 aa		28.83	■■■□□ 2.21
GGA2-215	ENST00000569189	GJB1	P08034	283 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	HAND2	P61296	217 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	PLS1	Q14651	629 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	GMCL1P1	Q8NEA9	526 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	TRIB2	Q92519	343 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	APBA2	Q99767	749 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	TOMM22	Q9NS69	142 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	IVNS1ABP	Q9Y6Y0	642 aa		28.82	■■■□□ 2.2
GGA2-215	ENST00000569189	SLC15A5	A6NIM6	579 aa		28.81	■■■□□ 2.2
GGA2-215	ENST00000569189	PTPRE	P23469	700 aa		28.81	■■■□□ 2.2
GGA2-215	ENST00000569189	MAP2K5	Q13163	448 aa		28.81	■■■□□ 2.2
GGA2-215	ENST00000569189	SHCBP1	Q8NEM2	672 aa		28.81	■■■□□ 2.2
GGA2-215	ENST00000569189	NKX2-3	Q8TAU0	364 aa		28.81	■■■□□ 2.2
GGA2-215	ENST00000569189	TRMT44	Q8IYL2	757 aa	Known RBP	28.8	■■■□□ 2.2
GGA2-215	ENST00000569189	SLF1	Q9BQI6	1058 aa		28.8	■■■□□ 2.2
GGA2-215	ENST00000569189	NBPF3	Q9H094	633 aa		28.8	■■■□□ 2.2
GGA2-215	ENST00000569189	ZNFX1	Q9P2E3	1918 aa	Known RBP	28.8	■■■□□ 2.2
GGA2-215	ENST00000569189	VWA5A	O00534	786 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	NMT2	O60551	498 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	ERCC3	P19447	782 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	GJA8	P48165	433 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	GRB14	Q14449	540 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	TMEM132B	Q14DG7	1078 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	RRP12	Q5JTH9	1297 aa	Known RBP	28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	SHISA4	Q96DD7	197 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	IL17RB	Q9NRM6	502 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	STX8	Q9UNK0	236 aa		28.79	■■■□□ 2.2
GGA2-215	ENST00000569189	PC	P11498	1178 aa	Known RBP	28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	ZKSCAN1	P17029	563 aa	Predicted RBP	28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	TRIM32	Q13049	653 aa		28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	AKNAD1	Q5T1N1	836 aa		28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	SLFN13	Q68D06	897 aa		28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	TBC1D10C	Q8IV04	446 aa		28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	STAG1	Q8WVM7	1258 aa		28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	DSCC1	Q9BVC3	393 aa		28.78	■■■□□ 2.2
GGA2-215	ENST00000569189	RAD50	Q92878	1312 aa		28.77	■■■□□ 2.2
GGA2-215	ENST00000569189	MFSD6	Q6ZSS7	791 aa		28.77	■■■□□ 2.2
GGA2-215	ENST00000569189	NCAPG2	Q86XI2	1143 aa		28.77	■■■□□ 2.2
GGA2-215	ENST00000569189	U2AF1L4	Q8WU68	220 aa	Known RBP	28.77	■■■□□ 2.2
GGA2-215	ENST00000569189	MROH8	Q9H579	483 aa		28.77	■■■□□ 2.2
GGA2-215	ENST00000569189	PAK6	Q9NQU5	681 aa	Predicted RBP	28.77	■■■□□ 2.2
GGA2-215	ENST00000569189	ZNF213	O14771	459 aa		28.76	■■■□□ 2.19
GGA2-215	ENST00000569189	STRN	O43815	780 aa		28.76	■■■□□ 2.19
GGA2-215	ENST00000569189	CCL14	Q16627	93 aa		28.76	■■■□□ 2.19
GGA2-215	ENST00000569189	REPS2	Q8NFH8	660 aa		28.76	■■■□□ 2.19
GGA2-215	ENST00000569189	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	28.76	■■■□□ 2.19	3e-6	■■□□□ 14.1
GGA2-215	ENST00000569189	IL25	Q9H293	177 aa		28.76	■■■□□ 2.19
GGA2-215	ENST00000569189	RNF41	Q9H4P4	317 aa	Predicted RBP	28.76	■■■□□ 2.19
GGA2-215	ENST00000569189	FEM1B	Q9UK73	627 aa		28.76	■■■□□ 2.19
GGA2-215	ENST00000569189	SLC25A27	O95847	323 aa		28.75	■■■□□ 2.19
GGA2-215	ENST00000569189	NOV	P48745	357 aa		28.75	■■■□□ 2.19
GGA2-215	ENST00000569189	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.75	■■■□□ 2.19
GGA2-215	ENST00000569189	PRPF38A	Q8NAV1	312 aa	Known RBP	28.75	■■■□□ 2.19
GGA2-215	ENST00000569189	GMCL1	Q96IK5	515 aa		28.75	■■■□□ 2.19
GGA2-215	ENST00000569189	ZNF214	Q9UL59	606 aa	Predicted RBP	28.75	■■■□□ 2.19
GGA2-215	ENST00000569189	RPTOR	Q8N122	1335 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	SGPL1	O95470	568 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	HOXC6	P09630	235 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	BMP3	P12645	472 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	PRKAR2A	P13861	404 aa	Known RBP	28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	CHML	P26374	656 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	MAP3K21	Q5TCX8	1036 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	RIOX2	Q8IUF8	465 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	RUFY2	Q8WXA3	655 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	DEFB118	Q96PH6	123 aa		28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	HMX1	Q9NP08	348 aa	Predicted RBP	28.74	■■■□□ 2.19
GGA2-215	ENST00000569189	ADORA2A	P29274	412 aa		28.73	■■■□□ 2.19
GGA2-215	ENST00000569189	STAT3	P40763	770 aa		28.73	■■■□□ 2.19
GGA2-215	ENST00000569189	KIFC2	Q96AC6	838 aa		28.73	■■■□□ 2.19
GGA2-215	ENST00000569189	TCP11L1	Q9NUJ3	509 aa		28.73	■■■□□ 2.19
GGA2-215	ENST00000569189	CTNNA3	Q9UI47	895 aa		28.73	■■■□□ 2.19
GGA2-215	ENST00000569189	ISY1	Q9ULR0	285 aa	Known RBP	28.73	■■■□□ 2.19
GGA2-215	ENST00000569189	NEDD4	P46934	1319 aa		28.72	■■■□□ 2.19
GGA2-215	ENST00000569189	PLXNA1	Q9UIW2	1896 aa		28.72	■■■□□ 2.19
GGA2-215	ENST00000569189	COPB2	P35606	906 aa		28.72	■■■□□ 2.19
GGA2-215	ENST00000569189	SLC1A4	P43007	532 aa		28.72	■■■□□ 2.19
GGA2-215	ENST00000569189	ABRA	Q8N0Z2	381 aa		28.72	■■■□□ 2.19
GGA2-215	ENST00000569189	MCC	P23508	829 aa		28.71	■■■□□ 2.19
GGA2-215	ENST00000569189	CACNB2	Q08289	660 aa	Predicted RBP	28.71	■■■□□ 2.19
GGA2-215	ENST00000569189	IMMT	Q16891	758 aa	Known RBP	28.71	■■■□□ 2.19

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