RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SMC5Q8IY18 1101 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 MIGA1Q8NAN2 632 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 CFHR5Q9BXR6 569 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 CRNKL1Q9BZJ0 848 aaKnown RBP11.07□□□□□ -0.64
CAPN3-219ENST00000569136 ZMYND15Q9H091 742 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
CAPN3-219ENST00000569136 GINM1Q9NU53 330 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
CAPN3-219ENST00000569136 ATRNL1Q5VV63 1379 aa11.06□□□□□ -0.64
CAPN3-219ENST00000569136 ZFYP08048 801 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-219ENST00000569136 ADD2P35612 726 aa11.06□□□□□ -0.64
CAPN3-219ENST00000569136 MAPKAPK5Q8IW41 473 aa11.06□□□□□ -0.64
CAPN3-219ENST00000569136 SCYL3Q8IZE3 742 aa11.06□□□□□ -0.64
CAPN3-219ENST00000569136 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
CAPN3-219ENST00000569136 RIOK1Q9BRS2 568 aaKnown RBP11.06□□□□□ -0.64
CAPN3-219ENST00000569136 ZCCHC17Q9NP64 241 aaKnown RBP11.06□□□□□ -0.64
CAPN3-219ENST00000569136 STAP2Q9UGK3 403 aa11.06□□□□□ -0.64
CAPN3-219ENST00000569136 SNCAIPQ9Y6H5 919 aa11.06□□□□□ -0.64
CAPN3-219ENST00000569136 PAPPA2Q9BXP8 1791 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 TCRBV5S4A2TA0A5A2 114 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 A6NJR5 290 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 GDF9O60383 454 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 MX1P20591 662 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 INPP5BP32019 993 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 DYNLL1P63167 89 aaKnown RBP11.05□□□□□ -0.64
CAPN3-219ENST00000569136 COL13A1Q5TAT6 717 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-219ENST00000569136 FASTKD5Q7L8L6 764 aaKnown RBP11.05□□□□□ -0.64
CAPN3-219ENST00000569136 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 TRPM7Q96QT4 1865 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 ATP8A2Q9NTI2 1148 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 ZHX2Q9Y6X8 837 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 FLT1P17948 1338 aa11.05□□□□□ -0.64
CAPN3-219ENST00000569136 RFX7Q2KHR2 1363 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 SSC5DA1L4H1 1573 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 CCL15-CCL14A0A0B4J2E2 113 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 RNF113AO15541 343 aaKnown RBP11.04□□□□□ -0.64
CAPN3-219ENST00000569136 PTPRAP18433 802 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 CAP2P40123 477 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 NUCB1Q02818 461 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 CCL15Q16663 113 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 CRACR2BQ8N4Y2 399 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-219ENST00000569136 EDC3Q96F86 508 aaKnown RBP11.04□□□□□ -0.64
CAPN3-219ENST00000569136 PALD1Q9ULE6 856 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
CAPN3-219ENST00000569136 A0A1B0GUL6 1792 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 IGHDP01880 384 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 POLR3DP05423 398 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-219ENST00000569136 PDE1AP54750 535 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 TRIM67Q6ZTA4 783 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 VASH1Q7L8A9 365 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-219ENST00000569136 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 AMOTL1Q8IY63 956 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 SNIP1Q8TAD8 396 aaKnown RBP11.03□□□□□ -0.64
CAPN3-219ENST00000569136 BRI3BPQ8WY22 251 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 EVI5LQ96CN4 794 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 PTPN18Q99952 460 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 EHD4Q9H223 541 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 ZFYVE28Q9HCC9 887 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 SERPINB13Q9UIV8 391 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 AFG3L2Q9Y4W6 797 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 WASF2Q9Y6W5 498 aa11.03□□□□□ -0.64
CAPN3-219ENST00000569136 COL2A1P02458 1487 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-219ENST00000569136 USP17L5A8MUK1 530 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 GPR25O00155 361 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 GFRA3O60609 400 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 TBC1D8O95759 1140 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 ASNSP08243 561 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 GNAT2P19087 354 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 ARHGEF6Q15052 776 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 ANKRD23Q86SG2 305 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 PI4K2BQ8TCG2 481 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 C1QTNF2Q9BXJ5 285 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 AS3MTQ9HBK9 375 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.65
CAPN3-219ENST00000569136 SAP30BPQ9UHR5 308 aaKnown RBP11.02□□□□□ -0.65
CAPN3-219ENST00000569136 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-219ENST00000569136 IGF2BP3O00425 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
CAPN3-219ENST00000569136 SIAH2O43255 324 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 FKTNO75072 461 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 MBD4O95243 580 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 RAB15P59190 212 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 SEMA3FQ13275 785 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 PKN2Q16513 984 aaKnown RBP11.01□□□□□ -0.65
CAPN3-219ENST00000569136 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 ZNF280CQ8ND82 737 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 OTUD7AQ8TE49 926 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-219ENST00000569136 APPBP2Q92624 585 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 STRBPQ96SI9 672 aaKnown RBP11.01□□□□□ -0.65
CAPN3-219ENST00000569136 WDR18Q9BV38 432 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 ARMT1Q9H993 441 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 DCP1AQ9NPI6 582 aaPredicted RBP11.01□□□□□ -0.65
CAPN3-219ENST00000569136 SLC45A1Q9Y2W3 748 aa11.01□□□□□ -0.65
CAPN3-219ENST00000569136 POM121CA8CG34 1229 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 C19orf81C9J6K1 198 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
CAPN3-219ENST00000569136 BTBD19C9JJ37 291 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms