RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 LRRC47Q8N1G4 583 aaKnown RBP20.81■□□□□ 0.92
EDC3-215ENST00000569007 TRIB2Q92519 343 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 MKL1Q969V6 931 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 SHISA4Q96DD7 197 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 SPATC1LQ9H0A9 340 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 A0A0G2JMZ2 1700 aa20.81■□□□□ 0.92
EDC3-215ENST00000569007 PTPREP23469 700 aa20.8■□□□□ 0.92
EDC3-215ENST00000569007 GJA8P48165 433 aa20.8■□□□□ 0.92
EDC3-215ENST00000569007 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
EDC3-215ENST00000569007 MAP2K5Q13163 448 aa20.8■□□□□ 0.92
EDC3-215ENST00000569007 PLS1Q14651 629 aa20.8■□□□□ 0.92
EDC3-215ENST00000569007 NKX2-3Q8TAU0 364 aa20.8■□□□□ 0.92
EDC3-215ENST00000569007 ZMYM6O95789 1325 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 SLC15A5A6NIM6 579 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 TSPY2A6NKD2 308 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 HIP1O00291 1037 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 ORC4O43929 436 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 GSPT1P15170 499 aaKnown RBP20.79■□□□□ 0.92
EDC3-215ENST00000569007 TTC22Q5TAA0 569 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 U2AF1L4Q8WU68 220 aaKnown RBP20.79■□□□□ 0.92
EDC3-215ENST00000569007 APBA2Q99767 749 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 PPP1R9AQ9ULJ8 1098 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 SYNPO2Q9UMS6 1093 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 ADAMTS5Q9UNA0 930 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 IVNS1ABPQ9Y6Y0 642 aa20.79■□□□□ 0.92
EDC3-215ENST00000569007 PARP14Q460N5 1801 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 RANBP6O60518 1105 aaKnown RBP20.78■□□□□ 0.92
EDC3-215ENST00000569007 FGRP09769 529 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 ZKSCAN1P17029 563 aaPredicted RBP20.78■□□□□ 0.92
EDC3-215ENST00000569007 ERCC3P19447 782 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 HAND2P61296 217 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 TMEM132BQ14DG7 1078 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 CCL14Q16627 93 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 SHCBP1Q8NEM2 672 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 DEFB118Q96PH6 123 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 PAK6Q9NQU5 681 aaPredicted RBP20.78■□□□□ 0.92
EDC3-215ENST00000569007 MYH4Q9Y623 1939 aa20.78■□□□□ 0.92
EDC3-215ENST00000569007 VWA5AO00534 786 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 NMT2O60551 498 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 SGPL1O95470 568 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 GRB14Q14449 540 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 TRMT44Q8IYL2 757 aaKnown RBP20.77■□□□□ 0.92
EDC3-215ENST00000569007 GMCL1P1Q8NEA9 526 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 SLF1Q9BQI6 1058 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.77■□□□□ 0.92
EDC3-215ENST00000569007 IL17RBQ9NRM6 502 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 TOMM22Q9NS69 142 aa20.77■□□□□ 0.92
EDC3-215ENST00000569007 RRP12Q5JTH9 1297 aaKnown RBP20.76■□□□□ 0.91
EDC3-215ENST00000569007 SLFN13Q68D06 897 aa20.76■□□□□ 0.91
EDC3-215ENST00000569007 NCAPG2Q86XI2 1143 aa20.76■□□□□ 0.91
EDC3-215ENST00000569007 NBPF3Q9H094 633 aa20.76■□□□□ 0.91
EDC3-215ENST00000569007 MROH8Q9H579 483 aa20.76■□□□□ 0.91
EDC3-215ENST00000569007 HMX1Q9NP08 348 aaPredicted RBP20.76■□□□□ 0.91
EDC3-215ENST00000569007 STX8Q9UNK0 236 aa20.76■□□□□ 0.91
EDC3-215ENST00000569007 RPTORQ8N122 1335 aa20.76■□□□□ 0.91
EDC3-215ENST00000569007 PRKAR2AP13861 404 aaKnown RBP20.75■□□□□ 0.91
EDC3-215ENST00000569007 PPP4R3BQ5MIZ7 849 aa20.75■□□□□ 0.91
EDC3-215ENST00000569007 MAP3K21Q5TCX8 1036 aa20.75■□□□□ 0.91
EDC3-215ENST00000569007 REPS2Q8NFH8 660 aa20.75■□□□□ 0.91
EDC3-215ENST00000569007 STRNO43815 780 aa20.74■□□□□ 0.91
EDC3-215ENST00000569007 TFRCP02786 760 aaKnown RBP20.74■□□□□ 0.91
EDC3-215ENST00000569007 HOXC6P09630 235 aa20.74■□□□□ 0.91
EDC3-215ENST00000569007 ADORA2AP29274 412 aa20.74■□□□□ 0.91
EDC3-215ENST00000569007 TBC1D10CQ8IV04 446 aa20.74■□□□□ 0.91
EDC3-215ENST00000569007 PRPF38AQ8NAV1 312 aaKnown RBP20.74■□□□□ 0.91
EDC3-215ENST00000569007 FLRT1Q9NZU1 646 aa20.74■□□□□ 0.91
EDC3-215ENST00000569007 ZNF214Q9UL59 606 aaPredicted RBP20.74■□□□□ 0.91
EDC3-215ENST00000569007 COL11A1P12107 1806 aaPredicted RBP20.74■□□□□ 0.91
EDC3-215ENST00000569007 SLC25A27O95847 323 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 BMP3P12645 472 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 STAT3P40763 770 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 CACNB2Q08289 660 aaPredicted RBP20.73■□□□□ 0.91
EDC3-215ENST00000569007 AKNAD1Q5T1N1 836 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 DPP9Q86TI2 863 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 RIOX2Q8IUF8 465 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 NPLOC4Q8TAT6 608 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 KIFC2Q96AC6 838 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 CHMP4CQ96CF2 233 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 CRISPLD2Q9H0B8 497 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 FEM1BQ9UK73 627 aa20.73■□□□□ 0.91
EDC3-215ENST00000569007 ISY1Q9ULR0 285 aaKnown RBP20.73■□□□□ 0.91
EDC3-215ENST00000569007 ZNF213O14771 459 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 NOVP48745 357 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 PRPF38BQ5VTL8 546 aaKnown RBP20.72■□□□□ 0.91
EDC3-215ENST00000569007 MFSD6Q6ZSS7 791 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 UBE2Q1Q7Z7E8 422 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 ABRAQ8N0Z2 381 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 STAG1Q8WVM7 1258 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 GMCL1Q96IK5 515 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 DSCC1Q9BVC3 393 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 IL25Q9H293 177 aa20.72■□□□□ 0.91
EDC3-215ENST00000569007 COBLO75128 1261 aa20.71■□□□□ 0.91
EDC3-215ENST00000569007 FARP2O94887 1054 aaPredicted RBP20.71■□□□□ 0.91
EDC3-215ENST00000569007 PCP11498 1178 aaKnown RBP20.71■□□□□ 0.91
EDC3-215ENST00000569007 FCER1AP12319 257 aa20.71■□□□□ 0.91
EDC3-215ENST00000569007 MCCP23508 829 aa20.71■□□□□ 0.91
EDC3-215ENST00000569007 SLC1A4P43007 532 aa20.71■□□□□ 0.91
EDC3-215ENST00000569007 MFSD14CQ5VZR4 134 aa20.71■□□□□ 0.91
EDC3-215ENST00000569007 TEX13BQ9BXU2 312 aa20.71■□□□□ 0.91
EDC3-215ENST00000569007 RNF41Q9H4P4 317 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms