RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PRDM6Q9NQX0 595 aa18■□□□□ 0.47
USB1-214ENST00000568848 MUC3AQ02505 3323 aa18■□□□□ 0.47
USB1-214ENST00000568848 MBD4O95243 580 aa17.99■□□□□ 0.47
USB1-214ENST00000568848 ICA1Q05084 483 aa17.99■□□□□ 0.47
USB1-214ENST00000568848 SHCBP1Q8NEM2 672 aa17.99■□□□□ 0.47
USB1-214ENST00000568848 RHPN1Q8TCX5 695 aa17.99■□□□□ 0.47
USB1-214ENST00000568848 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
USB1-214ENST00000568848 XPNPEP3Q9NQH7 507 aa17.99■□□□□ 0.47
USB1-214ENST00000568848 HOXC10Q9NYD6 342 aa17.99■□□□□ 0.47
USB1-214ENST00000568848 MYADML2A6NDP7 307 aa17.98■□□□□ 0.47
USB1-214ENST00000568848 FOSL2P15408 326 aa17.98■□□□□ 0.47
USB1-214ENST00000568848 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
USB1-214ENST00000568848 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
USB1-214ENST00000568848 MMP19Q99542 508 aa17.98■□□□□ 0.47
USB1-214ENST00000568848 VCPKMTQ9H867 229 aa17.98■□□□□ 0.47
USB1-214ENST00000568848 STRNO43815 780 aa17.97■□□□□ 0.47
USB1-214ENST00000568848 EEF2P13639 858 aaKnown RBP17.97■□□□□ 0.47
USB1-214ENST00000568848 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
USB1-214ENST00000568848 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
USB1-214ENST00000568848 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
USB1-214ENST00000568848 TMX2Q9Y320 296 aa17.97■□□□□ 0.47
USB1-214ENST00000568848 A0A1W2PQ45 241 aaPredicted RBP17.96■□□□□ 0.47
USB1-214ENST00000568848 A0A1W2PQY0 241 aa17.96■□□□□ 0.47
USB1-214ENST00000568848 FCER1AP12319 257 aa17.96■□□□□ 0.47
USB1-214ENST00000568848 CDK8P49336 464 aa17.96■□□□□ 0.47
USB1-214ENST00000568848 FAM83BQ5T0W9 1011 aa17.96■□□□□ 0.47
USB1-214ENST00000568848 BOLA2Q9H3K6 86 aa17.96■□□□□ 0.47
USB1-214ENST00000568848 MROH8Q9H579 483 aa17.96■□□□□ 0.47
USB1-214ENST00000568848 GRXCR1A8MXD5 290 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 ADCY6O43306 1168 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 CLTBP09497 229 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 ZNF865P0CJ78 1059 aaPredicted RBP17.95■□□□□ 0.46
USB1-214ENST00000568848 PTGS1P23219 599 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 ZNF792Q3KQV3 632 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 CERS3Q8IU89 383 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 SIRT2Q8IXJ6 389 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 ARHGEF10LQ9HCE6 1279 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 RAPGEFL1Q9UHV5 662 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 RIPK3Q9Y572 518 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 MCM3APO60318 1980 aa17.95■□□□□ 0.46
USB1-214ENST00000568848 USP17L12C9JPN9 530 aa17.94■□□□□ 0.46
USB1-214ENST00000568848 USP17L21D6R901 530 aa17.94■□□□□ 0.46
USB1-214ENST00000568848 RARBP10826 455 aa17.94■□□□□ 0.46
USB1-214ENST00000568848 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
USB1-214ENST00000568848 REPS2Q8NFH8 660 aa17.94■□□□□ 0.46
USB1-214ENST00000568848 PPM1EQ8WY54 764 aa17.94■□□□□ 0.46
USB1-214ENST00000568848 CHMP4CQ96CF2 233 aa17.94■□□□□ 0.46
USB1-214ENST00000568848 TINF2Q9BSI4 451 aa17.94■□□□□ 0.46
USB1-214ENST00000568848 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.94■□□□□ 0.46
USB1-214ENST00000568848 DDX49Q9Y6V7 483 aaKnown RBP17.94■□□□□ 0.46
USB1-214ENST00000568848 WDR46O15213 610 aaKnown RBP17.93■□□□□ 0.46
USB1-214ENST00000568848 ADAMTS4O75173 837 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 RAG1P15918 1043 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 ADD2P35612 726 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 PBX2P40425 430 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 FAAP100Q0VG06 881 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 C12orf60Q5U649 245 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 MB21D1Q8N884 522 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 TMEM39AQ9NV64 488 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 ZNF214Q9UL59 606 aaPredicted RBP17.93■□□□□ 0.46
USB1-214ENST00000568848 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 MYO9BQ13459 2157 aa17.93■□□□□ 0.46
USB1-214ENST00000568848 RBAK-RBAKDNI3L0D1 243 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 VWA5AO00534 786 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 IGSF3O75054 1194 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 STAT3P40763 770 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 HNRNPUQ00839 825 aaKnown RBP eCLIP17.92■□□□□ 0.46
USB1-214ENST00000568848 TTF1Q15361 905 aaPredicted RBP17.92■□□□□ 0.46
USB1-214ENST00000568848 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 RIOX2Q8IUF8 465 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 ABRAQ8N0Z2 381 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 PAG1Q9NWQ8 432 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 SWAP70Q9UH65 585 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
USB1-214ENST00000568848 ADAMTS5Q9UNA0 930 aa17.92■□□□□ 0.46
USB1-214ENST00000568848 CHD9Q3L8U1 2897 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 KIAA0355O15063 1070 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 SNAI1O95863 264 aaPredicted RBP17.91■□□□□ 0.46
USB1-214ENST00000568848 IFIT2P09913 472 aaKnown RBP17.91■□□□□ 0.46
USB1-214ENST00000568848 DNAJB2P25686 324 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 FPGSQ05932 587 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 KCTD2Q14681 263 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.46
USB1-214ENST00000568848 SLC5A4Q9NY91 659 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 PPP1R9AQ9ULJ8 1098 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 TACC3Q9Y6A5 838 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 SLC4A4Q9Y6R1 1079 aa17.91■□□□□ 0.46
USB1-214ENST00000568848 MYH7P12883 1935 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 SMARCA5O60264 1052 aaPredicted RBP17.9■□□□□ 0.46
USB1-214ENST00000568848 ACRP10323 421 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 ACLYP53396 1101 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 C1orf53Q5VUE5 145 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 CTR9Q6PD62 1173 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 C16orf86Q6ZW13 317 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 C16orf59Q7L2K0 433 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 RNF180Q86T96 592 aa17.9■□□□□ 0.46
USB1-214ENST00000568848 PUS7LQ9H0K6 701 aaKnown RBP17.9■□□□□ 0.46
USB1-214ENST00000568848 SLC25A27O95847 323 aa17.89■□□□□ 0.45
USB1-214ENST00000568848 AKR1A1P14550 325 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms