RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 ALADP13716 330 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 POU3F3P20264 500 aaPredicted RBP11.79□□□□□ -0.52
KARS-209ENST00000568378 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
KARS-209ENST00000568378 IL15P40933 162 aaPredicted RBP11.79□□□□□ -0.52
KARS-209ENST00000568378 COG2Q14746 738 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 KRT40Q6A162 431 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 TANGO6Q9C0B7 1094 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 AATFQ9NY61 560 aaKnown RBP eCLIP11.79□□□□□ -0.52
KARS-209ENST00000568378 HOXC10Q9NYD6 342 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 SAP30BPQ9UHR5 308 aaKnown RBP11.79□□□□□ -0.52
KARS-209ENST00000568378 CNPY2Q9Y2B0 182 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 ELP1O95163 1332 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 SYNRGQ9UMZ2 1314 aa11.79□□□□□ -0.52
KARS-209ENST00000568378 A0A0U1RQG5 324 aaPredicted RBP11.78□□□□□ -0.52
KARS-209ENST00000568378 TAL1P17542 331 aaPredicted RBP11.78□□□□□ -0.52
KARS-209ENST00000568378 TIMM10P62072 90 aa11.78□□□□□ -0.52
KARS-209ENST00000568378 MVPQ14764 893 aaKnown RBP11.78□□□□□ -0.52
KARS-209ENST00000568378 TMEM67Q5HYA8 995 aa11.78□□□□□ -0.52
KARS-209ENST00000568378 GJD3Q8N144 294 aa11.78□□□□□ -0.52
KARS-209ENST00000568378 ACER1Q8TDN7 264 aa11.78□□□□□ -0.52
KARS-209ENST00000568378 CDCA7LQ96GN5 454 aa11.78□□□□□ -0.52
KARS-209ENST00000568378 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
KARS-209ENST00000568378 LRP2BPQ9P2M1 347 aa11.78□□□□□ -0.52
KARS-209ENST00000568378 ARVCFO00192 962 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 CA3P07451 260 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 ATP2A2P16615 1042 aaKnown RBP11.77□□□□□ -0.53
KARS-209ENST00000568378 CDK7P50613 346 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 FAM126BQ8IXS8 530 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 MB21D1Q8N884 522 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 SPATA5Q8NB90 893 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.53
KARS-209ENST00000568378 KLHDC9Q8NEP7 349 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 ARNTL2Q8WYA1 636 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 XAGE2Q96GT9 111 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 MMP19Q99542 508 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 USP44Q9H0E7 712 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 CABP5Q9NP86 173 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 HMG20BQ9P0W2 317 aa11.77□□□□□ -0.53
KARS-209ENST00000568378 A0A1B0GUL7 405 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 ST18O60284 1047 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 PGK2P07205 417 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 ASGR1P07306 291 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 C6orf222P0C671 652 aaPredicted RBP11.76□□□□□ -0.53
KARS-209ENST00000568378 ZNF865P0CJ78 1059 aaPredicted RBP11.76□□□□□ -0.53
KARS-209ENST00000568378 FOXK2Q01167 660 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 ABCB5Q2M3G0 1257 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 GORABQ5T7V8 394 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 NAA16Q6N069 864 aaPredicted RBP11.76□□□□□ -0.53
KARS-209ENST00000568378 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
KARS-209ENST00000568378 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 FAM184BQ9ULE4 1060 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 A0A0G2JMZ2 1700 aa11.76□□□□□ -0.53
KARS-209ENST00000568378 TRANK1O15050 2925 aa11.75□□□□□ -0.53
KARS-209ENST00000568378 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
KARS-209ENST00000568378 EPOPA6NHQ4 379 aa11.75□□□□□ -0.53
KARS-209ENST00000568378 CCL23P55773 120 aa11.75□□□□□ -0.53
KARS-209ENST00000568378 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
KARS-209ENST00000568378 KCTD2Q14681 263 aa11.75□□□□□ -0.53
KARS-209ENST00000568378 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
KARS-209ENST00000568378 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
KARS-209ENST00000568378 NEUROD6Q96NK8 337 aa11.75□□□□□ -0.53
KARS-209ENST00000568378 ZHX1Q9UKY1 873 aaPredicted RBP11.75□□□□□ -0.53
KARS-209ENST00000568378 PA2G4Q9UQ80 394 aaKnown RBP11.75□□□□□ -0.53
KARS-209ENST00000568378 AKAP2Q9Y2D5 859 aa11.75□□□□□ -0.53
KARS-209ENST00000568378 SLC25A27O95847 323 aa11.74□□□□□ -0.53
KARS-209ENST00000568378 CST5P28325 142 aaPredicted RBP11.74□□□□□ -0.53
KARS-209ENST00000568378 CCSAPQ6IQ19 270 aaPredicted RBP11.74□□□□□ -0.53
KARS-209ENST00000568378 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
KARS-209ENST00000568378 FAM178BQ8IXR5 827 aa11.74□□□□□ -0.53
KARS-209ENST00000568378 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
KARS-209ENST00000568378 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
KARS-209ENST00000568378 UMODL1Q5DID0 1318 aa11.74□□□□□ -0.53
KARS-209ENST00000568378 CDK5RAP2Q96SN8 1893 aa11.74□□□□□ -0.53
KARS-209ENST00000568378 DCXO43602 365 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 DUSP11O75319 330 aaKnown RBP11.73□□□□□ -0.53
KARS-209ENST00000568378 FLOT1O75955 427 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 CD4P01730 458 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 DSG3P32926 999 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 PPP4CP60510 307 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 GRB10Q13322 594 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 ZNF792Q3KQV3 632 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 GNASQ5JWF2 1037 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 WDR63Q8IWG1 891 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 ATG4CQ96DT6 458 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 SERPINB13Q9UIV8 391 aa11.73□□□□□ -0.53
KARS-209ENST00000568378 ZNFX1Q9P2E3 1918 aaKnown RBP11.72□□□□□ -0.53
KARS-209ENST00000568378 FOCADQ5VW36 1801 aa11.72□□□□□ -0.53
KARS-209ENST00000568378 WDFY4Q6ZS81 3184 aa11.72□□□□□ -0.53
KARS-209ENST00000568378 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
KARS-209ENST00000568378 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
KARS-209ENST00000568378 UBE2ZQ9H832 354 aaPredicted RBP11.72□□□□□ -0.53
KARS-209ENST00000568378 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
KARS-209ENST00000568378 ZNF536O15090 1300 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 PTPRCP08575 1304 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 KIF28PB7ZC32 967 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
KARS-209ENST00000568378 UBTFL1P0CB47 393 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms