RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CYP2C8P10632 490 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 USP17L24Q0WX57 530 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 OTUD7BQ6GQQ9 843 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 POTEEQ6S8J3 1075 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 SGMS1Q86VZ5 419 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 DCAF4Q8WV16 495 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 CHMP4CQ96CF2 233 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 R3HDMLQ9H3Y0 253 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 MTMR7Q9Y216 660 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 CYP46A1Q9Y6A2 500 aa21.09■□□□□ 0.97
COMMD4-222ENST00000568034 CA12O43570 354 aa21.08■□□□□ 0.97
COMMD4-222ENST00000568034 BMP3P12645 472 aa21.08■□□□□ 0.97
COMMD4-222ENST00000568034 TROAPQ12815 778 aa21.08■□□□□ 0.97
COMMD4-222ENST00000568034 PABPC4Q13310 644 aaKnown RBP eCLIP21.08■□□□□ 0.97
COMMD4-222ENST00000568034 CRHR2Q13324 411 aa21.08■□□□□ 0.97
COMMD4-222ENST00000568034 TAF1CQ15572 869 aaPredicted RBP21.08■□□□□ 0.97
COMMD4-222ENST00000568034 Q6ZUG5 572 aa21.08■□□□□ 0.97
COMMD4-222ENST00000568034 PARK7Q99497 189 aaKnown RBP21.08■□□□□ 0.97
COMMD4-222ENST00000568034 UPF2Q9HAU5 1272 aaKnown RBP21.08■□□□□ 0.97
COMMD4-222ENST00000568034 FBXO28Q9NVF7 368 aa21.08■□□□□ 0.97
COMMD4-222ENST00000568034 SAGE1Q9NXZ1 904 aa21.08■□□□□ 0.97
COMMD4-222ENST00000568034 A0A0G2JMZ2 1700 aa21.07■□□□□ 0.96
COMMD4-222ENST00000568034 TRPA1O75762 1119 aa21.07■□□□□ 0.96
COMMD4-222ENST00000568034 SLC1A4P43007 532 aa21.07■□□□□ 0.96
COMMD4-222ENST00000568034 ZNF543Q08ER8 600 aa21.07■□□□□ 0.96
COMMD4-222ENST00000568034 TOB2Q14106 344 aaPredicted RBP21.07■□□□□ 0.96
COMMD4-222ENST00000568034 P2RX7Q99572 595 aaKnown RBP21.07■□□□□ 0.96
COMMD4-222ENST00000568034 TANGO6Q9C0B7 1094 aa21.07■□□□□ 0.96
COMMD4-222ENST00000568034 PNMA3Q9UL41 463 aa21.07■□□□□ 0.96
COMMD4-222ENST00000568034 BRPF3Q9ULD4 1205 aa21.07■□□□□ 0.96
COMMD4-222ENST00000568034 FRMPD2Q68DX3 1309 aaPredicted RBP21.06■□□□□ 0.96
COMMD4-222ENST00000568034 SPDYE16A6NNV3 312 aaPredicted RBP21.06■□□□□ 0.96
COMMD4-222ENST00000568034 OSBPP22059 807 aa21.06■□□□□ 0.96
COMMD4-222ENST00000568034 IRX3P78415 501 aaPredicted RBP21.06■□□□□ 0.96
COMMD4-222ENST00000568034 KCTD1Q719H9 257 aa21.06■□□□□ 0.96
COMMD4-222ENST00000568034 ZNF654Q8IZM8 581 aa21.06■□□□□ 0.96
COMMD4-222ENST00000568034 TMTC2Q8N394 836 aa21.06■□□□□ 0.96
COMMD4-222ENST00000568034 MYL10Q9BUA6 226 aa21.06■□□□□ 0.96
COMMD4-222ENST00000568034 FLOT1O75955 427 aa21.05■□□□□ 0.96
COMMD4-222ENST00000568034 TBC1D8O95759 1140 aa21.05■□□□□ 0.96
COMMD4-222ENST00000568034 HERVK_113P62684 666 aa21.05■□□□□ 0.96
COMMD4-222ENST00000568034 TTBK2Q6IQ55 1244 aa21.05■□□□□ 0.96
COMMD4-222ENST00000568034 BRF1Q92994 677 aa21.05■□□□□ 0.96
COMMD4-222ENST00000568034 ZFYVE28Q9HCC9 887 aa21.05■□□□□ 0.96
COMMD4-222ENST00000568034 PDRG1Q9NUG6 133 aa21.05■□□□□ 0.96
COMMD4-222ENST00000568034 CCDC69A6NI79 296 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 TLR2O60603 784 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 PLA2G6O60733 806 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 DDAH1O94760 285 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 DSG3P32926 999 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 COG2Q14746 738 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 GRM4Q14833 912 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 CCDC96Q2M329 555 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 APOA5Q6Q788 366 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 C17orf99Q6UX52 265 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 LBX2Q6XYB7 198 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 CATIPQ7Z7H3 387 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 ATG4CQ96DT6 458 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 FEM1BQ9UK73 627 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 PPP1R9AQ9ULJ8 1098 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 MYPNQ86TC9 1320 aa21.04■□□□□ 0.96
COMMD4-222ENST00000568034 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-222ENST00000568034 TMEM232C9JQI7 657 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 PEX10O60683 326 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 CNMDO75829 334 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 GOLGA8HP0CJ92 632 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 EVCP57679 992 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 APOBRQ0VD83 1088 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 BTNL9Q6UXG8 535 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 NFXL1Q6ZNB6 911 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 RAB11FIP4Q86YS3 637 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 STAG2Q8N3U4 1231 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 SLF1Q9BQI6 1058 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 ALDH8A1Q9H2A2 487 aaPredicted RBP21.03■□□□□ 0.96
COMMD4-222ENST00000568034 GPCPD1Q9NPB8 672 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 MAD2L2Q9UI95 211 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 TSKSQ9UJT2 592 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 ADAMTS5Q9UNA0 930 aa21.03■□□□□ 0.96
COMMD4-222ENST00000568034 KLF18A0A0U1RQI7 1052 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 HSPA1AP0DMV8 641 aaKnown RBP21.02■□□□□ 0.96
COMMD4-222ENST00000568034 HSPA1BP0DMV9 641 aaKnown RBP21.02■□□□□ 0.96
COMMD4-222ENST00000568034 BCRP11274 1271 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 RXRAP19793 462 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 STAT2P52630 851 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 SLC35G1Q2M3R5 365 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 ASPRV1Q53RT3 343 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 GPATCH4Q5T3I0 446 aaKnown RBP21.02■□□□□ 0.96
COMMD4-222ENST00000568034 REPS2Q8NFH8 660 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 SMCR8Q8TEV9 937 aaPredicted RBP21.02■□□□□ 0.96
COMMD4-222ENST00000568034 MAP3K14Q99558 947 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 TXNRD2Q9NNW7 524 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 SLC12A7Q9Y666 1083 aa21.02■□□□□ 0.96
COMMD4-222ENST00000568034 NID2Q14112 1375 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 PARP1P09874 1014 aaKnown RBP21.01■□□□□ 0.95
COMMD4-222ENST00000568034 SLC16A2P36021 539 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 FGD1P98174 961 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 FAM160B2Q86V87 743 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 MICU3Q86XE3 530 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 NUP133Q8WUM0 1156 aa21.01■□□□□ 0.95
COMMD4-222ENST00000568034 BEGAINQ9BUH8 593 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms