RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 PDHBP11177 359 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 KRT26Q7Z3Y9 468 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 CCDC84Q86UT8 332 aaPredicted RBP12.11□□□□□ -0.47
TCF4-236ENST00000567880 FERMT3Q86UX7 667 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 HOOK2Q96ED9 719 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 C8orf76Q96K31 380 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 GJB4Q9NTQ9 266 aa12.11□□□□□ -0.47
TCF4-236ENST00000567880 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
TCF4-236ENST00000567880 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
TCF4-236ENST00000567880 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 F13A1P00488 732 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 ASNSP08243 561 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 INPP5BP32019 993 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 ECE1P42892 770 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 SUPT20HL1Q3ZLR7 823 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 CHAMP1Q96JM3 812 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 RNF26Q9BY78 433 aaPredicted RBP12.1□□□□□ -0.47
TCF4-236ENST00000567880 ZNF341Q9BYN7 854 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 CPVLQ9H3G5 476 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 OTOFQ9HC10 1997 aa12.1□□□□□ -0.47
TCF4-236ENST00000567880 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
TCF4-236ENST00000567880 DEXIO95424 95 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 BRD2P25440 801 aaKnown RBP12.09□□□□□ -0.47
TCF4-236ENST00000567880 GNAQP50148 359 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 FUT2Q10981 343 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 UBE2Q2Q8WVN8 375 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 WASF1Q92558 559 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 MKL1Q969V6 931 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 STK25O00506 426 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
TCF4-236ENST00000567880 ZYXQ15942 572 aaKnown RBP12.09□□□□□ -0.47
TCF4-236ENST00000567880 KCTD1Q719H9 257 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 USP48Q86UV5 1035 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
TCF4-236ENST00000567880 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
TCF4-236ENST00000567880 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
TCF4-236ENST00000567880 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
TCF4-236ENST00000567880 PHIPQ8WWQ0 1821 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 F5H6K3 240 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
TCF4-236ENST00000567880 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 SLC1A4P43007 532 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 KLRC3Q07444 240 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 ZNF543Q08ER8 600 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 TRIM29Q14134 588 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 NFKBIBQ15653 356 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 SLFN13Q68D06 897 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 GBP4Q96PP9 640 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 GLIS2Q9BZE0 524 aaPredicted RBP12.08□□□□□ -0.48
TCF4-236ENST00000567880 RRAGCQ9HB90 399 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
TCF4-236ENST00000567880 CYTH3O43739 400 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 SNHG28P0DPA3 235 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 PKN1Q16512 942 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 SLC35G1Q2M3R5 365 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 KRT40Q6A162 431 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 HOMER1Q86YM7 354 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 FBXO18Q8NFZ0 1043 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 NUP88Q99567 741 aaPredicted RBP12.07□□□□□ -0.48
TCF4-236ENST00000567880 FEZ1Q99689 392 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 BAG4O95429 457 aaKnown RBP12.07□□□□□ -0.48
TCF4-236ENST00000567880 NDUFB10O96000 172 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 SLC16A2P36021 539 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 GPATCH4Q5T3I0 446 aaKnown RBP12.07□□□□□ -0.48
TCF4-236ENST00000567880 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 GMCL1P1Q8NEA9 526 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 KLRG1Q96E93 195 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 CDCA5Q96FF9 252 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 LZTS2Q9BRK4 669 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
TCF4-236ENST00000567880 SCG2P13521 617 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 VEGFAP15692 232 aaPredicted RBP12.06□□□□□ -0.48
TCF4-236ENST00000567880 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
TCF4-236ENST00000567880 NF2P35240 595 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 IKQ13123 557 aaPredicted RBP12.06□□□□□ -0.48
TCF4-236ENST00000567880 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 DCAF4Q8WV16 495 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 SPZ1Q9BXG8 430 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 PICK1Q9NRD5 415 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 ZNF112Q9UJU3 913 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 KCNJ14Q9UNX9 436 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 TMX2Q9Y320 296 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms